Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS11Q9H270 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
VPS11Q9H270 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 AC111188.2-201ENST00000529697 1387 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VPS11Q9H270 PSG10P-201ENST00000501199 1500 ntBASIC5.79□□□□□ -1.48
VPS11Q9H270 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VPS11Q9H270 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC083899.1-201ENST00000454465 3819 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS11Q9H270 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC002525.1-201ENST00000624392 1622 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 PARP4P2-201ENST00000446672 3326 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS11Q9H270 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
VPS11Q9H270 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS11Q9H270 Y_RNA.41-201ENST00000362646 102 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS11Q9H270 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS11Q9H270 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AL603865.2-201ENST00000401679 213 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AL021331.1-201ENST00000402817 582 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 RNA5SP198-201ENST00000410376 127 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC099782.1-201ENST00000425889 474 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AL593851.1-201ENST00000426171 157 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS11Q9H270 MTCO3P21-201ENST00000430791 643 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 MTND3P23-201ENST00000431980 347 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 RPSAP32-201ENST00000432681 526 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC064862.5-201ENST00000440618 334 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS11Q9H270 PTENP1-201ENST00000447117 1215 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS11Q9H270 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS11Q9H270 Z95152.1-201ENST00000453556 656 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 MRPL35P4-201ENST00000453682 566 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
VPS11Q9H270 RPL6P9-201ENST00000466502 859 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 RN7SL269P-201ENST00000467795 305 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VPS11Q9H270 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC093281.2-201ENST00000510153 597 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AC022447.1-201ENST00000515358 464 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AC138938.1-201ENST00000515431 782 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS11Q9H270 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS11Q9H270 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS11Q9H270 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS11Q9H270 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS11Q9H270 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS11Q9H270 NPM1P47-201ENST00000560843 856 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC023813.2-201ENST00000564321 469 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 MT1CP-201ENST00000567054 174 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AL078601.3-201ENST00000573303 535 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC022069.1-201ENST00000582910 658 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 ELOCP28-201ENST00000590044 317 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AL606834.2-201ENST00000602954 668 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 DPRXP5-201ENST00000604662 539 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AL163642.2-201ENST00000604722 1019 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AC145423.1-201ENST00000605712 336 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC092653.1-201ENST00000608509 531 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 MIR7973-1-201ENST00000614683 76 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AC007204.2-201ENST00000615022 616 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AL158063.1-201ENST00000615349 536 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS11Q9H270 FAM27E2-201ENST00000619668 403 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS11Q9H270 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS11Q9H270 AC104964.3-201ENST00000606115 2860 ntBASIC5.78□□□□□ -1.48
VPS11Q9H270 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS11Q9H270 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS11Q9H270 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS11Q9H270 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS11Q9H270 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS11Q9H270 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS11Q9H270 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS11Q9H270 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS11Q9H270 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 AC008627.1-201ENST00000517511 1704 ntBASIC5.77□□□□□ -1.49
VPS11Q9H270 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS11Q9H270 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms