Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX3Q99909 AL627308.1-201ENST00000435693 821 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.38□□□□□ -1.71
SSX3Q99909 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX3Q99909 TPTE2P6-202ENST00000445572 1007 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX3Q99909 AL031584.1-201ENST00000447169 754 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AL672138.1-201ENST00000450604 1015 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AL162388.1-201ENST00000450912 352 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX3Q99909 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX3Q99909 RPS21P4-201ENST00000487122 248 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 RPS24P16-201ENST00000497294 392 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 RPEP1-201ENST00000504507 658 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 PGAM1P13-201ENST00000507497 754 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 HIGD1AP14-201ENST00000507617 282 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SSX3Q99909 NDUFB4P12-201ENST00000513465 390 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX3Q99909 RN7SKP46-201ENST00000515942 234 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 RNA5SP92-201ENST00000516437 110 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 SNORA31.13-201ENST00000516624 135 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 RNU6-467P-201ENST00000517027 110 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AC027308.1-201ENST00000517993 110 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX3Q99909 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX3Q99909 AP002812.4-201ENST00000532139 286 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX3Q99909 AC126177.5-201ENST00000549599 178 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX3Q99909 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX3Q99909 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
SSX3Q99909 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX3Q99909 AC005341.1-201ENST00000571086 708 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 RBM22P1-201ENST00000578589 1214 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 RN7SL176P-201ENST00000580352 264 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 OR7E18P-201ENST00000592589 702 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.38□□□□□ -1.71
SSX3Q99909 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AC005972.3-201ENST00000606304 481 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AP001033.2-201ENST00000609701 1003 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 BX323046.1-201ENST00000610145 535 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AC010435.1-201ENST00000623353 1177 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX3Q99909 MIR6715B-201ENST00000637172 77 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
SSX3Q99909 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 MAPK10-320ENST00000641462 6696 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 AC139713.2-215ENST00000641428 5037 ntBASIC4.38□□□□□ -1.71
SSX3Q99909 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX3Q99909 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX3Q99909 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX3Q99909 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.37□□□□□ -1.71
SSX3Q99909 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX3Q99909 C4BPAP1-201ENST00000415474 1893 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.37□□□□□ -1.71
SSX3Q99909 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSX3Q99909 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.37□□□□□ -1.71
SSX3Q99909 RNU6-984P-201ENST00000363236 109 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 RNU6-1279P-201ENST00000383917 103 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 MIR142-201ENST00000384835 87 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 SNORA40.4-201ENST00000390971 128 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 RNU4-34P-201ENST00000410431 124 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 RN7SKP125-201ENST00000410481 302 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 MTCO3P4-201ENST00000419236 787 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 RPS12P5-201ENST00000423449 371 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 RPL12P17-201ENST00000432393 498 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 ELOCP11-201ENST00000436690 332 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 ELOCP16-201ENST00000444494 332 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SSX3Q99909 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX3Q99909 RPS26P41-201ENST00000450370 284 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX3Q99909 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSX3Q99909 AZGP1P2-201ENST00000454506 345 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 RPS20P4-201ENST00000461659 355 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.37□□□□□ -1.71
SSX3Q99909 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX3Q99909 AC109464.1-201ENST00000511091 819 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 AC010285.3-201ENST00000511668 676 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.37□□□□□ -1.71
SSX3Q99909 TCP11X3P-202ENST00000514289 1254 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.37□□□□□ -1.71
SSX3Q99909 DEFB109D-201ENST00000529497 240 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 HAUS8P1-201ENST00000549005 542 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 AL121594.4-201ENST00000556211 1196 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 AC051619.2-201ENST00000559063 397 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.37□□□□□ -1.71
SSX3Q99909 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSX3Q99909 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX3Q99909 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
SSX3Q99909 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.37□□□□□ -1.71
SSX3Q99909 U6.48-201ENST00000618523 106 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 AC024023.1-201ENST00000624530 922 ntBASIC4.37□□□□□ -1.71
SSX3Q99909 AC097372.4-201ENST00000625025 466 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms