Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 Y_RNA.318-201ENST00000365131 97 ntBASIC5.54□□□□□ -1.52
SMOQ99835 RNU1-106P-201ENST00000384382 164 ntBASIC5.54□□□□□ -1.52
SMOQ99835 MIR1302-8-201ENST00000408342 128 ntBASIC5.54□□□□□ -1.52
SMOQ99835 MORF4L1P6-201ENST00000418771 268 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AC016907.1-201ENST00000419483 435 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.54□□□□□ -1.52
SMOQ99835 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.54□□□□□ -1.52
SMOQ99835 AL592437.1-201ENST00000443781 492 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AL161722.1-201ENST00000446972 1032 ntBASIC5.54□□□□□ -1.52
SMOQ99835 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.54□□□□□ -1.52
SMOQ99835 AC092685.1-201ENST00000447960 1243 ntBASIC5.54□□□□□ -1.52
SMOQ99835 RPL7P41-201ENST00000485823 957 ntBASIC5.54□□□□□ -1.52
SMOQ99835 RPL15P21-201ENST00000495592 567 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AC093890.1-201ENST00000502554 540 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AC026782.2-201ENST00000510845 636 ntBASIC5.54□□□□□ -1.52
SMOQ99835 MRPS33P3-201ENST00000513456 322 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.54□□□□□ -1.52
SMOQ99835 MTCO1P47-201ENST00000523889 1271 ntBASIC5.54□□□□□ -1.52
SMOQ99835 MTND2P26-201ENST00000528255 1029 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.54□□□□□ -1.52
SMOQ99835 AC024940.3-201ENST00000538551 316 ntBASIC5.54□□□□□ -1.52
SMOQ99835 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.54□□□□□ -1.52
SMOQ99835 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 AC090695.1-201ENST00000561269 1222 ntBASIC5.54□□□□□ -1.52
SMOQ99835 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.54□□□□□ -1.52
SMOQ99835 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.54□□□□□ -1.52
SMOQ99835 MIR3691-201ENST00000578066 90 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.54□□□□□ -1.52
SMOQ99835 VN1R83P-201ENST00000595685 445 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AP003392.5-201ENST00000607857 415 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AP000255.1-201ENST00000610276 676 ntBASIC5.54□□□□□ -1.52
SMOQ99835 AL158163.2-201ENST00000619110 700 ntBASIC5.54□□□□□ -1.52
SMOQ99835 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.54□□□□□ -1.52
SMOQ99835 AC068620.4-201ENST00000636730 1182 ntBASIC5.54□□□□□ -1.52
SMOQ99835 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.54□□□□□ -1.52
SMOQ99835 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SMOQ99835 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.54□□□□□ -1.52
SMOQ99835 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
SMOQ99835 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.54□□□□□ -1.52
SMOQ99835 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
SMOQ99835 CASC19-281ENST00000642118 1554 ntBASIC5.54□□□□□ -1.52
SMOQ99835 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMOQ99835 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMOQ99835 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMOQ99835 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMOQ99835 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.53□□□□□ -1.52
SMOQ99835 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMOQ99835 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMOQ99835 AP002512.4-202ENST00000641599 4530 ntBASIC5.53□□□□□ -1.52
SMOQ99835 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMOQ99835 OR9G4-201ENST00000302957 984 ntBASIC5.53□□□□□ -1.52
SMOQ99835 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMOQ99835 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.53□□□□□ -1.52
SMOQ99835 RNU1-19P-201ENST00000363306 165 ntBASIC5.53□□□□□ -1.52
SMOQ99835 RNA5SP90-201ENST00000364801 99 ntBASIC5.53□□□□□ -1.52
SMOQ99835 SNORD116.1-201ENST00000365628 92 ntBASIC5.53□□□□□ -1.52
SMOQ99835 NUDT19P3-201ENST00000404698 555 ntBASIC5.53□□□□□ -1.52
SMOQ99835 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMOQ99835 AL356131.1-201ENST00000405826 414 ntBASIC5.53□□□□□ -1.52
SMOQ99835 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.53□□□□□ -1.52
SMOQ99835 AL590084.1-201ENST00000407885 387 ntBASIC5.53□□□□□ -1.52
SMOQ99835 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.53□□□□□ -1.52
SMOQ99835 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.53□□□□□ -1.52
SMOQ99835 REREP1Y-201ENST00000422655 198 ntBASIC5.53□□□□□ -1.52
SMOQ99835 CLUHP1-201ENST00000435012 1190 ntBASIC5.53□□□□□ -1.52
SMOQ99835 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.53□□□□□ -1.52
SMOQ99835 REREP2Y-201ENST00000439103 200 ntBASIC5.53□□□□□ -1.52
SMOQ99835 FGF7P5-201ENST00000441829 291 ntBASIC5.53□□□□□ -1.52
SMOQ99835 RPL34P26-201ENST00000445636 354 ntBASIC5.53□□□□□ -1.52
SMOQ99835 AC090804.1-201ENST00000448870 490 ntBASIC5.53□□□□□ -1.52
SMOQ99835 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.53□□□□□ -1.52
SMOQ99835 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.53□□□□□ -1.52
SMOQ99835 AC108161.1-201ENST00000461060 402 ntBASIC5.53□□□□□ -1.52
SMOQ99835 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.53□□□□□ -1.52
SMOQ99835 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.53□□□□□ -1.52
SMOQ99835 AC008565.1-201ENST00000509046 885 ntBASIC5.53□□□□□ -1.52
SMOQ99835 RNU6-1129P-201ENST00000515964 104 ntBASIC5.53□□□□□ -1.52
SMOQ99835 RNU5A-4P-201ENST00000516588 111 ntBASIC5.53□□□□□ -1.52
SMOQ99835 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.53□□□□□ -1.52
SMOQ99835 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.53□□□□□ -1.52
SMOQ99835 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.53□□□□□ -1.52
SMOQ99835 MTCO3P15-201ENST00000526563 574 ntBASIC5.53□□□□□ -1.52
SMOQ99835 GCSHP4-201ENST00000538792 439 ntBASIC5.53□□□□□ -1.52
SMOQ99835 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMOQ99835 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMOQ99835 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.53□□□□□ -1.52
SMOQ99835 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.53□□□□□ -1.52
SMOQ99835 AP005136.1-201ENST00000579765 429 ntBASIC5.53□□□□□ -1.52
SMOQ99835 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.53□□□□□ -1.52
SMOQ99835 AP001269.3-201ENST00000588718 329 ntBASIC5.53□□□□□ -1.52
SMOQ99835 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.53□□□□□ -1.52
SMOQ99835 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.53□□□□□ -1.52
SMOQ99835 AC009597.2-201ENST00000604659 592 ntBASIC5.53□□□□□ -1.52
SMOQ99835 AC011626.1-201ENST00000604710 562 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms