Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 Z98745.1-201ENST00000402553 494 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 OR51B3P-201ENST00000412287 913 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 RPL7P57-201ENST00000423238 740 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 RN7SL205P-201ENST00000490174 284 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 RPL36AP41-201ENST00000493820 306 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 RNA5SP303-201ENST00000516192 130 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 PDCD5P1-201ENST00000543528 309 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 MTND2P13-201ENST00000577438 1039 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 RN7SL690P-201ENST00000582087 240 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 RN7SL52P-201ENST00000584271 284 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AC073091.2-201ENST00000603205 907 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AL592494.3-201ENST00000609485 464 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 RN7SL722P-201ENST00000617780 284 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 RN7SL565P-201ENST00000618246 284 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AL023881.1-201ENST00000621088 301 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AC015908.5-201ENST00000623289 343 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AC010329.2-201ENST00000595195 2737 ntBASIC4.82□□□□□ -1.64
RPRD1AQ96P16 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.82□□□□□ -1.64
RPRD1AQ96P16 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AL356317.1-201ENST00000396110 1436 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 RNU6-398P-201ENST00000384143 109 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AL080315.1-201ENST00000406055 466 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC119751.6-201ENST00000416712 186 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 OR2AH1P-201ENST00000425717 928 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 NMNAT1P2-201ENST00000435192 860 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AL138878.2-201ENST00000440581 1241 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 MRPL48P1-201ENST00000445390 636 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC108463.1-201ENST00000450258 347 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 CEACAMP6-201ENST00000452007 574 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC104763.1-201ENST00000475274 360 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC020890.1-201ENST00000491837 504 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 CR383656.6-201ENST00000550518 394 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC105129.1-201ENST00000560250 297 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC068790.7-201ENST00000602347 528 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC117490.2-201ENST00000610042 594 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AC021106.3-201ENST00000623925 531 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 AL445437.1-201ENST00000623157 3087 ntBASIC4.81□□□□□ -1.64
RPRD1AQ96P16 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RPRD1AQ96P16 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 ZNF137P-201ENST00000456718 1920 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AC108467.2-201ENST00000617640 1597 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 RN7SKP115-201ENST00000363177 317 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 RNA5SP505-201ENST00000364748 108 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 RNA5SP105-201ENST00000391123 113 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AL049697.2-201ENST00000403708 294 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 RPL26P29-201ENST00000415623 438 ntBASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPRD1AQ96P16 AC092570.3-201ENST00000420113 693 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms