Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AL596275.2-204ENST00000641628 552 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 AL596275.2-206ENST00000641957 626 ntBASIC4.71□□□□□ -1.66
C9orf72Q96LT7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
C9orf72Q96LT7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC079741.1-201ENST00000321498 212 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 RPS16P5-201ENST00000406501 404 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AL591848.1-201ENST00000413092 322 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 PDSS1P1-201ENST00000422953 1114 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 TRGV7-201ENST00000427089 353 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 NRBF2P3-201ENST00000432731 865 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC011753.3-201ENST00000443436 406 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 NPM1P39-201ENST00000449818 867 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 MTND6P32-201ENST00000457611 483 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC022795.1-201ENST00000473808 480 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 STMN1P2-201ENST00000508435 439 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 RN7SKP276-201ENST00000516242 268 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 EIF4EP5-201ENST00000528228 640 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AP006289.1-201ENST00000538089 277 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC096553.1-201ENST00000605169 829 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 MIR6798-201ENST00000612887 67 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC010435.1-201ENST00000623353 1177 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AL391684.1-202ENST00000641293 1636 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 AC007382.1-201ENST00000624376 2618 ntBASIC4.7□□□□□ -1.66
C9orf72Q96LT7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
C9orf72Q96LT7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 RN7SKP224-201ENST00000364140 325 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 RNU6-398P-201ENST00000384143 109 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 AC010740.1-201ENST00000417035 684 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 BX510359.2-201ENST00000417920 305 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 TPT1P13-201ENST00000449760 499 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 RPL23AP65-201ENST00000475608 468 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 AC090013.1-201ENST00000485147 480 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 IGLV3-26-201ENST00000520756 302 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 SOX5P1-201ENST00000524155 1127 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 AP003499.2-201ENST00000624100 483 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 AC055839.1-201ENST00000634467 498 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 MFSD8-216ENST00000641147 4009 ntBASIC4.69□□□□□ -1.66
C9orf72Q96LT7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.69□□□□□ -1.66
C9orf72Q96LT7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 ZFRP1-201ENST00000457579 2970 ntBASIC4.68□□□□□ -1.66
C9orf72Q96LT7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
C9orf72Q96LT7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms