Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RPL7P55-201ENST00000450522 746 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RPL37P3-201ENST00000456825 293 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC010683.1-201ENST00000473673 378 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RPL21P47-201ENST00000483696 477 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 NIP7P2-201ENST00000485801 544 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RN7SL547P-201ENST00000490793 290 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 MTCO2P9-201ENST00000503214 694 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 ARL4AP1-201ENST00000503220 705 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 SNORD116-26-201ENST00000516006 96 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC027308.1-201ENST00000517993 110 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 MTND2P7-201ENST00000521337 640 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC126177.5-201ENST00000549599 178 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC106785.3-201ENST00000564064 847 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC104695.2-201ENST00000605056 775 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 MIR8069-1-201ENST00000616627 86 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 MIR8069-2-201ENST00000621412 86 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 CDRT1-208ENST00000630868 794 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AP001273.1-201ENST00000624493 3152 ntBASIC4.84□□□□□ -1.63
VPS33AQ96AX1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.84□□□□□ -1.64
VPS33AQ96AX1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.84□□□□□ -1.64
VPS33AQ96AX1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC134882.1-201ENST00000603738 1676 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AL133268.1-201ENST00000405676 1401 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 SNORD56.4-201ENST00000363883 71 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 FAM96AP1-201ENST00000430879 482 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 TXNP5-201ENST00000441043 315 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 TPTE2P6-202ENST00000445572 1007 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 RN7SL443P-201ENST00000464331 290 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AL133445.1-201ENST00000467051 452 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 BUD31P1-201ENST00000521828 359 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC027104.1-201ENST00000563702 681 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC116553.2-201ENST00000564203 463 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC084824.5-201ENST00000612009 413 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 RPSAP73-201ENST00000614820 330 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 STMN1P1-201ENST00000617809 440 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 FRG1HP-204ENST00000617940 757 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC106730.3-201ENST00000624568 641 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AC027290.2-201ENST00000623210 18662 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS33AQ96AX1 SALL4P2-201ENST00000423288 2910 ntBASIC4.83□□□□□ -1.64
VPS33AQ96AX1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AL031119.1-201ENST00000404707 1879 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 SNORA40.4-201ENST00000390971 128 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 MIR1182-201ENST00000408363 97 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 Z68694.1-201ENST00000413929 841 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 UBE2D3P3-201ENST00000426992 425 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 MOB1AP2-201ENST00000446060 614 ntBASIC4.82□□□□□ -1.64
VPS33AQ96AX1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS33AQ96AX1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms