Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC092013.1-201ENST00000438795 332 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC000111.2-201ENST00000448200 210 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 RPS26P41-201ENST00000450370 284 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC012158.1-204ENST00000483430 465 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SL97P-201ENST00000486780 299 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SL244P-201ENST00000493405 297 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC016550.3-201ENST00000515706 767 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC022826.1-201ENST00000519383 805 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 MTND2P7-201ENST00000521337 640 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AL049779.2-201ENST00000553847 315 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC005520.3-201ENST00000602874 370 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 RPL26P30-202ENST00000602923 645 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC009237.17-201ENST00000618111 748 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AL035461.2-201ENST00000619201 524 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC099494.2-201ENST00000623371 978 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 HPVC1-201ENST00000629899 1198 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 OR11H5P-202ENST00000641612 1325 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 HSPD1P14-201ENST00000432666 1618 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC011493.1-201ENST00000596753 1632 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 OR56B2P-201ENST00000317102 954 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 RPL26P37-201ENST00000411983 438 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 BTF3P9-201ENST00000418784 283 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 MTND4LP7-201ENST00000431728 294 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC245517.2-201ENST00000442890 346 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 SUMO2P1-206ENST00000445436 284 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 YRDCP3-201ENST00000456507 480 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC084754.1-201ENST00000463466 464 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC021205.1-201ENST00000468797 348 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SL222P-201ENST00000476452 299 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC025181.1-201ENST00000477507 416 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 MTND6P6-201ENST00000478031 263 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 HAUS1P1-201ENST00000505275 832 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 COX6B1P5-201ENST00000509843 249 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 VWA8P1-201ENST00000510889 176 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 OR7E128P-201ENST00000532736 1024 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC027455.1-201ENST00000574104 594 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 SLC25A36P1-201ENST00000590111 465 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 MIR6837-201ENST00000620884 64 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AL359757.1-201ENST00000623176 255 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 AC015813.6-201ENST00000624409 5808 ntBASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC71LQ8N9Z2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
CCDC71LQ8N9Z2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC71LQ8N9Z2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms