Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC006971.1-201ENST00000407916 4486 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 SNORD96B-201ENST00000386148 79 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AL035419.1-201ENST00000397037 564 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 OR1F12-201ENST00000402365 945 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AL121578.1-201ENST00000428051 892 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 RPL21P91-201ENST00000429231 479 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 TCP11X3P-202ENST00000514289 1254 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC134698.5-201ENST00000519444 336 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 HMGB3P26-201ENST00000560051 582 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 MIR4270-201ENST00000581799 70 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC023762.1-201ENST00000603280 584 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC090971.4-201ENST00000560291 1800 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC092435.4-201ENST00000623012 4159 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AC018529.3-201ENST00000624212 2254 ntBASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC65Q8IXS2 AP001002.1-201ENST00000625148 1513 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 OR51C1P-202ENST00000641159 1444 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 RN7SKP103-201ENST00000363848 320 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 SDHCP2-201ENST00000398565 501 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 FCF1P5-201ENST00000406490 482 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 RN7SKP106-201ENST00000410832 272 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC009302.1-201ENST00000417147 390 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 USP9YP9-201ENST00000429406 715 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 NFYAP1-201ENST00000431953 972 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 OR6C71P-201ENST00000432580 913 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC006466.1-201ENST00000438721 289 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 RPL36AP15-201ENST00000444514 266 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 RPL23AP65-201ENST00000475608 468 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC108022.1-201ENST00000493466 478 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 RNA5SP446-201ENST00000515955 82 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 CYCSP28-201ENST00000534284 321 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 DUX4L52-201ENST00000549363 777 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 ATP5J2P6-201ENST00000565203 266 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 OR7M1P-201ENST00000608946 533 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC140113.4-201ENST00000622087 222 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC005086.4-201ENST00000623065 213 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AP001784.1-201ENST00000624107 428 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 AC107021.2-201ENST00000567714 2095 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 EOGT-210ENST00000615922 1931 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 CR382285.2-201ENST00000624662 1495 ntBASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC65Q8IXS2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 DDX18P4-201ENST00000511690 1966 ntBASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 AC021146.4-201ENST00000309229 279 ntBASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 EIF2S2P5-201ENST00000457635 968 ntBASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 RPL35AP28-201ENST00000459730 331 ntBASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 AC010326.1-201ENST00000462726 602 ntBASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC65Q8IXS2 MTND2P17-201ENST00000550281 688 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms