Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 MIR378H-201ENST00000579966 83 ntBASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 AC013244.1-201ENST00000604279 193 ntBASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 AC004908.1-201ENST00000606572 541 ntBASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 AC022893.3-201ENST00000607665 437 ntBASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 BX664608.1-201ENST00000610519 487 ntBASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 MIR6889-201ENST00000613185 59 ntBASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 AC097641.3-201ENST00000613523 464 ntBASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 AC119674.1-212ENST00000641155 993 ntBASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCUBE3Q8IX30 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 Y_RNA.46-201ENST00000362695 102 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 RNU6-289P-201ENST00000364093 107 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 SET-203ENST00000372688 801 ntTSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 Y_RNA.556-201ENST00000384677 113 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 FAUP2-201ENST00000394301 401 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 SNORA11.3-201ENST00000408471 128 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 RNU4-26P-201ENST00000410270 107 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AL357752.1-201ENST00000412817 349 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC244452.1-201ENST00000413798 141 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AL160004.2-201ENST00000432935 350 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AL935212.3-201ENST00000450729 284 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC005517.1-201ENST00000452091 489 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC002075.1-201ENST00000457396 676 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 RN7SL160P-201ENST00000468558 284 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC073610.1-201ENST00000489971 396 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC055733.3-201ENST00000505214 523 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC098591.2-201ENST00000510152 315 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AP000676.2-201ENST00000529711 301 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 NDUFA3P2-201ENST00000531434 232 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC126177.6-201ENST00000550420 1009 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 MIR548Y-201ENST00000582739 110 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC073539.2-201ENST00000597113 165 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 RNU6-89P-201ENST00000606519 100 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 SNORA11.6-201ENST00000619030 128 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC007347.2-201ENST00000623044 180 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 AC132219.2-201ENST00000624416 2327 ntBASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.51□□□□□ -1.21
SCUBE3Q8IX30 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms