Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 AC139769.1-204ENST00000472297 1931 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 VPS35P1-201ENST00000563400 1518 ntBASIC4.67□□□□□ -1.66
CDKL3Q8IVW4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC010928.1-201ENST00000592477 1447 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 NXPH1-205ENST00000602349 1953 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 RNU1-44P-201ENST00000384453 163 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 OR1F12-201ENST00000402365 945 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 RPL5P19-201ENST00000404228 893 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 MTND4LP21-201ENST00000415303 295 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC007394.1-201ENST00000421941 531 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC008072.1-201ENST00000434254 824 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 SBDSP1-204ENST00000453858 737 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 RN7SL610P-201ENST00000463845 291 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC090013.1-201ENST00000485147 480 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AP005119.2-201ENST00000579735 1105 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC008759.1-201ENST00000589783 983 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 BPIFA4P-203ENST00000603168 689 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AP002360.3-201ENST00000607673 710 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AL353726.1-201ENST00000614041 1000 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 MIR6730-201ENST00000622213 67 ntBASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDKL3Q8IVW4 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.65□□□□□ -1.66
CDKL3Q8IVW4 LINC00622-201ENST00000562811 1570 ntBASIC4.65□□□□□ -1.66
CDKL3Q8IVW4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CDKL3Q8IVW4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CDKL3Q8IVW4 AC090971.4-201ENST00000560291 1800 ntBASIC4.65□□□□□ -1.66
CDKL3Q8IVW4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.65□□□□□ -1.66
CDKL3Q8IVW4 UGT2B26P-201ENST00000508672 1613 ntBASIC4.65□□□□□ -1.66
CDKL3Q8IVW4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.65□□□□□ -1.66
CDKL3Q8IVW4 AC021146.4-201ENST00000309229 279 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 MIR298-201ENST00000401212 88 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AL589994.1-201ENST00000404962 340 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 RPS26P13-201ENST00000419030 330 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AP000936.3-201ENST00000438127 255 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 PA2G4P6-201ENST00000438325 1197 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AC099063.2-201ENST00000446360 662 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 RPS27AP15-201ENST00000447672 466 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 VN1R32P-201ENST00000452234 905 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 RPL32P9-201ENST00000487963 407 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 IGLV2-34-201ENST00000490007 283 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 ARL4AP1-201ENST00000503220 705 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 MTND2P17-201ENST00000550281 688 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AC090181.2-201ENST00000602975 672 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AC091979.2-201ENST00000607514 214 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AL445528.2-201ENST00000620582 470 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 CPHL1P-201ENST00000461341 3407 ntBASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDKL3Q8IVW4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms