Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 MTND4LP31-201ENST00000514859 294 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 NDUFA5P2-201ENST00000519723 344 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 NXPH1-205ENST00000602349 1953 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 Y_RNA.500-201ENST00000384466 111 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 RPL7P28-201ENST00000437739 740 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 RPS11P1-201ENST00000451072 473 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 ACTR3P3-201ENST00000480448 893 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 AC006064.5-201ENST00000541782 248 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 AC125257.1-201ENST00000560400 2930 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 SNORA74C-2-201ENST00000411179 201 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 RPL7P4-203ENST00000430239 730 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 AL358832.1-201ENST00000497800 389 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 AP003972.1-201ENST00000625192 5446 ntBASIC3.47□□□□□ -1.85
VPS13CQ709C8 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 SNORA70.6-201ENST00000383934 134 ntBASIC3.47□□□□□ -1.85
VPS13CQ709C8 RNU11-4P-201ENST00000391149 133 ntBASIC3.47□□□□□ -1.85
VPS13CQ709C8 BTF3P6-201ENST00000448054 499 ntBASIC3.47□□□□□ -1.85
VPS13CQ709C8 AC108145.1-201ENST00000503770 153 ntBASIC3.47□□□□□ -1.85
VPS13CQ709C8 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 AC093853.1-201ENST00000515689 483 ntBASIC3.47□□□□□ -1.85
VPS13CQ709C8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 AC010653.1-201ENST00000571108 881 ntBASIC3.47□□□□□ -1.85
VPS13CQ709C8 HMGB2P1-201ENST00000591146 634 ntBASIC3.47□□□□□ -1.85
VPS13CQ709C8 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 AL034370.1-201ENST00000397254 1590 ntBASIC3.47□□□□□ -1.85
VPS13CQ709C8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS13CQ709C8 RPL7P2-201ENST00000427639 268 ntBASIC3.47□□□□□ -1.85
VPS13CQ709C8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS13CQ709C8 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
VPS13CQ709C8 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
VPS13CQ709C8 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 MRPL48P1-201ENST00000445390 636 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 EIF2S2P5-201ENST00000457635 968 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 AC011816.2-201ENST00000607089 556 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 AP002360.3-201ENST00000607673 710 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 OR8G7P-201ENST00000616658 848 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS13CQ709C8 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
VPS13CQ709C8 AC004938.1-201ENST00000438468 308 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 AC115115.1-201ENST00000449927 248 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 AC024224.1-201ENST00000538284 609 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 RPL21P12-201ENST00000559810 515 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 AC110743.1-201ENST00000584870 478 ntBASIC3.46□□□□□ -1.86
VPS13CQ709C8 MIMT1-201ENST00000597105 1050 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms