Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RN7SKP162-201ENST00000363605 345 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 RNA5SP22-201ENST00000365393 109 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC079807.1-201ENST00000429993 481 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 RPL7P4-203ENST00000430239 730 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 FTH1P6-201ENST00000430768 320 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC234781.3-201ENST00000452540 973 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 RPS5P7-201ENST00000456664 608 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 RPL23AP71-201ENST00000470966 469 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC140172.1-201ENST00000502928 141 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 RN7SKP34-201ENST00000516142 244 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC008694.2-201ENST00000517591 306 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC133555.2-201ENST00000550213 292 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC011487.3-201ENST00000593607 453 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC020910.3-201ENST00000603701 874 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC073137.1-201ENST00000605636 634 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 AC107021.2-201ENST00000567714 2095 ntBASIC4.1□□□□□ -1.75
CCDC58Q4VC31 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC58Q4VC31 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 MIR323A-201ENST00000362199 86 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 SNORA62.2-201ENST00000364672 152 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 RNU6-1263P-201ENST00000384601 106 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 U3.30-201ENST00000391308 210 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 FCF1P5-201ENST00000406490 482 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 OR51B3P-201ENST00000412287 913 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 RN7SL172P-201ENST00000460535 303 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AP000926.1-201ENST00000479573 241 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC090013.1-201ENST00000485147 480 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC098799.3-201ENST00000506095 438 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC022832.1-201ENST00000530718 645 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC092851.1-201ENST00000535964 478 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 BNIP3P32-201ENST00000600015 554 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 HMGB1P50-201ENST00000605814 607 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 OR7A19P-201ENST00000608051 733 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 MIR6778-201ENST00000617912 73 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC091905.2-201ENST00000623143 306 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC017007.4-201ENST00000503353 1352 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC135352.1-201ENST00000506173 1418 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 NCLP2-201ENST00000416078 1462 ntBASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC58Q4VC31 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.09□□□□□ -1.76
CCDC58Q4VC31 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC58Q4VC31 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC58Q4VC31 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 SNORA74A-201ENST00000364089 198 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 RNA5SP242-201ENST00000364171 118 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AL138878.1-201ENST00000405131 347 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AL591848.1-201ENST00000413092 322 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 GJA6P-201ENST00000415117 1042 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC062016.2-201ENST00000420950 676 ntBASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC58Q4VC31 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms