Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC138761.5-201ENST00000433967 325 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 SETD6P1-201ENST00000444575 317 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 RPL10P17-201ENST00000453852 316 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 RPL7AP10-201ENST00000481016 791 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC108734.3-201ENST00000481241 1165 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC021678.3-201ENST00000517893 476 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AP000926.4-201ENST00000527351 454 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC105227.2-201ENST00000615075 605 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC022079.1-201ENST00000621546 602 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 THAP12P9-201ENST00000503971 2360 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 C4BPAP1-201ENST00000415474 1893 ntBASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CCDC144BQ3MJ40 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 Z99496.1-201ENST00000469424 1477 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC109780.1-201ENST00000451768 1344 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 GAPDHP24-201ENST00000328713 983 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 RN7SKP185-201ENST00000362813 326 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 RNU1-19P-201ENST00000363306 165 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 MIR92A2-201ENST00000385299 75 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 RNU6-272P-201ENST00000411028 104 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AP000534.2-201ENST00000412729 568 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AL357752.1-201ENST00000412817 349 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 RPL21P43-201ENST00000425440 472 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC113412.1-201ENST00000425840 504 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 NPM1P24-201ENST00000428039 894 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 MTCO2P25-201ENST00000447065 681 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 NECAP1P2-201ENST00000455668 727 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 RPS27P23-201ENST00000487608 251 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 RPL32P9-201ENST00000487963 407 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 RN7SL547P-201ENST00000490793 290 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 RPSAP51-201ENST00000497462 645 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC002456.2-201ENST00000509356 380 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC008494.2-201ENST00000514544 370 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC139365.2-201ENST00000517972 253 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 CDC42P3-201ENST00000518493 633 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AP003461.1-201ENST00000528866 78 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC009962.1-201ENST00000567327 3813 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 FKBP1AP1-201ENST00000594588 318 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AL390838.2-201ENST00000602394 274 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AL137072.1-201ENST00000603444 466 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC123786.2-201ENST00000603459 275 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AP000473.2-201ENST00000602659 1537 ntBASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms