Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LINC00622-201ENST00000562811 1570 ntBASIC5.53□□□□□ -1.52
PDS5AQ29RF7 AC008079.2-201ENST00000623543 20396 ntBASIC5.53□□□□□ -1.52
PDS5AQ29RF7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.52□□□□□ -1.52
PDS5AQ29RF7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 COX6CP17-201ENST00000421389 185 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 RAD23BP1-201ENST00000421404 1227 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 RN7SL385P-201ENST00000468873 276 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AC090589.1-201ENST00000473109 362 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AC026979.1-201ENST00000492525 396 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 RN7SKP122-201ENST00000515923 296 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AC012414.2-201ENST00000559474 187 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 MIR3936-201ENST00000584304 110 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 RN7SL435P-201ENST00000584418 282 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AL391001.1-201ENST00000602747 715 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AC024933.1-201ENST00000608472 348 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 AC253576.2-201ENST00000618815 580 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 VN2R3P-201ENST00000422626 1412 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 MAPK10-286ENST00000641208 8747 ntBASIC5.52□□□□□ -1.53
PDS5AQ29RF7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDS5AQ29RF7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AL031595.2-201ENST00000624215 19071 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 SNORA70.2-201ENST00000364506 135 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 RNA5SP509-201ENST00000364577 119 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 MTND4LP21-201ENST00000415303 295 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 RPL21P43-201ENST00000425440 472 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AL445528.1-201ENST00000426330 420 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AP001324.1-201ENST00000428553 399 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AC091390.1-201ENST00000433904 331 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 RNU6-943P-201ENST00000516960 98 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 MTND2P13-201ENST00000577438 1039 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AP001160.4-201ENST00000596971 382 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AC105148.1-201ENST00000604961 409 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AP000756.2-201ENST00000624168 2567 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AL136164.3-201ENST00000624429 3978 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 UGT2B26P-201ENST00000508672 1613 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AL391684.1-202ENST00000641293 1636 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 AL731566.1-201ENST00000620490 1937 ntBASIC5.51□□□□□ -1.53
PDS5AQ29RF7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.51□□□□□ -1.53
PDS5AQ29RF7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDS5AQ29RF7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PDS5AQ29RF7 OR4K17-201ENST00000315543 1032 ntBASIC5.5□□□□□ -1.53
PDS5AQ29RF7 SETP15-201ENST00000412724 337 ntBASIC5.5□□□□□ -1.53
PDS5AQ29RF7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms