Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNA1P78396 RPL7AP25-201ENST00000423357 805 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 RPS27AP12-201ENST00000429552 465 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNA1P78396 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCNA1P78396 FHP1-201ENST00000442741 703 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 RPL21P126-201ENST00000470049 478 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNA1P78396 AC093824.1-201ENST00000508796 343 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 RPL23AP53-201ENST00000521854 457 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNA1P78396 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.32□□□□□ -1.56
CCNA1P78396 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNA1P78396 AC021483.2-201ENST00000567415 758 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNA1P78396 AC096553.1-201ENST00000605169 829 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 AC023813.4-201ENST00000607580 580 ntBASIC5.32□□□□□ -1.56
CCNA1P78396 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNA1P78396 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNA1P78396 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CCNA1P78396 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCNA1P78396 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCNA1P78396 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CCNA1P78396 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCNA1P78396 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.32□□□□□ -1.56
CCNA1P78396 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCNA1P78396 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
CCNA1P78396 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCNA1P78396 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.31□□□□□ -1.56
CCNA1P78396 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.31□□□□□ -1.56
CCNA1P78396 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 SMG1P4-204ENST00000523028 4131 ntBASIC5.31□□□□□ -1.56
CCNA1P78396 AC021146.4-201ENST00000309229 279 ntBASIC5.31□□□□□ -1.56
CCNA1P78396 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 RNA5SP105-201ENST00000391123 113 ntBASIC5.31□□□□□ -1.56
CCNA1P78396 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.31□□□□□ -1.56
CCNA1P78396 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.31□□□□□ -1.56
CCNA1P78396 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.31□□□□□ -1.56
CCNA1P78396 AL358176.3-201ENST00000420757 454 ntBASIC5.31□□□□□ -1.56
CCNA1P78396 RPS29P17-201ENST00000430795 166 ntBASIC5.31□□□□□ -1.56
CCNA1P78396 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.31□□□□□ -1.56
CCNA1P78396 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.31□□□□□ -1.56
CCNA1P78396 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 SCARNA10-201ENST00000459255 330 ntBASIC5.31□□□□□ -1.56
CCNA1P78396 RN7SL809P-201ENST00000482040 297 ntBASIC5.31□□□□□ -1.56
CCNA1P78396 AC098799.3-201ENST00000506095 438 ntBASIC5.31□□□□□ -1.56
CCNA1P78396 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.31□□□□□ -1.56
CCNA1P78396 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.31□□□□□ -1.56
CCNA1P78396 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.31□□□□□ -1.56
CCNA1P78396 MIR3138-201ENST00000585238 82 ntBASIC5.31□□□□□ -1.56
CCNA1P78396 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.31□□□□□ -1.56
CCNA1P78396 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.31□□□□□ -1.56
CCNA1P78396 AP000648.2-201ENST00000624182 404 ntBASIC5.31□□□□□ -1.56
CCNA1P78396 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CCNA1P78396 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCNA1P78396 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNA1P78396 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.3□□□□□ -1.56
CCNA1P78396 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
CCNA1P78396 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.3□□□□□ -1.56
CCNA1P78396 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.3□□□□□ -1.56
CCNA1P78396 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCNA1P78396 SALL4P2-201ENST00000423288 2910 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.3□□□□□ -1.56
CCNA1P78396 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 SNORA68.2-201ENST00000391263 128 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 RN7SKP16-201ENST00000410180 299 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 AC011933.1-201ENST00000413334 321 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNA1P78396 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNA1P78396 AC116533.1-201ENST00000459748 321 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 MTCO1P35-201ENST00000515270 228 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 MIR2116-201ENST00000517221 80 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.3□□□□□ -1.56
CCNA1P78396 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNA1P78396 MIR4660-201ENST00000583549 74 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNA1P78396 AC011477.5-201ENST00000586571 259 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 IPO5P1-202ENST00000600039 287 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 AC004241.3-201ENST00000611728 517 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 AC114781.5-201ENST00000615297 108 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 BX005214.3-202ENST00000619809 325 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 AC138965.3-201ENST00000623875 498 ntBASIC5.3□□□□□ -1.56
CCNA1P78396 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.3□□□□□ -1.56
CCNA1P78396 AC138627.1-204ENST00000641894 765 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms