Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.4□□□□□ -1.71
RPS4XP62701 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.4□□□□□ -1.71
RPS4XP62701 AC063949.1-201ENST00000552900 865 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.4□□□□□ -1.71
RPS4XP62701 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.4□□□□□ -1.71
RPS4XP62701 MEMO1P5-201ENST00000604810 406 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 AC004775.1-201ENST00000607389 753 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 AC087385.3-201ENST00000620477 187 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 TCP1P3-201ENST00000414406 1498 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.4□□□□□ -1.71
RPS4XP62701 AP001642.1-201ENST00000624727 2117 ntBASIC4.4□□□□□ -1.71
RPS4XP62701 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPS4XP62701 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPS4XP62701 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPS4XP62701 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RPS4XP62701 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPS4XP62701 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPS4XP62701 SMG1P6-201ENST00000532337 2930 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RPS4XP62701 AL359922.3-201ENST00000624779 1670 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RPS4XP62701 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.39□□□□□ -1.71
RPS4XP62701 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RPS4XP62701 RN7SKP95-201ENST00000362860 303 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 RNU6-666P-201ENST00000363499 107 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 RNA5SP428-201ENST00000365129 132 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.39□□□□□ -1.71
RPS4XP62701 RNA5SP87-201ENST00000384155 118 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 MIR320B1-201ENST00000390209 79 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 CYB5AP4-201ENST00000396692 399 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 AL356057.1-202ENST00000402263 756 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.39□□□□□ -1.71
RPS4XP62701 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.39□□□□□ -1.71
RPS4XP62701 RPL26P29-201ENST00000415623 438 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 TBCAP2-201ENST00000416175 326 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.39□□□□□ -1.71
RPS4XP62701 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.39□□□□□ -1.71
RPS4XP62701 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.39□□□□□ -1.71
RPS4XP62701 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.39□□□□□ -1.71
RPS4XP62701 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.39□□□□□ -1.71
RPS4XP62701 RN7SL738P-201ENST00000470264 297 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 AC116562.1-201ENST00000485355 781 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 RN7SL205P-201ENST00000490174 284 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 CEACAMP10-202ENST00000495431 496 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.39□□□□□ -1.71
RPS4XP62701 AC093890.1-201ENST00000502554 540 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.39□□□□□ -1.71
RPS4XP62701 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.39□□□□□ -1.71
RPS4XP62701 AC021006.3-201ENST00000530771 192 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 AC008033.2-201ENST00000542626 177 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.39□□□□□ -1.71
RPS4XP62701 AL049870.4-201ENST00000555741 486 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 SS18L2P2-201ENST00000583960 235 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 RN7SL52P-201ENST00000584271 284 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 RNF138P2-201ENST00000603490 592 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 AC135178.6-201ENST00000605314 398 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 AC012557.1-201ENST00000607115 611 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 AC023813.4-201ENST00000607580 580 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 AC010424.2-201ENST00000607594 443 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 AL121890.2-201ENST00000617644 465 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 RN7SL722P-201ENST00000617780 284 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 RN7SL565P-201ENST00000618246 284 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.39□□□□□ -1.71
RPS4XP62701 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPS4XP62701 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RPS4XP62701 ZNF652P1-201ENST00000442420 1309 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RPS4XP62701 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.39□□□□□ -1.71
RPS4XP62701 AC093591.2-201ENST00000565254 3843 ntBASIC4.39□□□□□ -1.71
RPS4XP62701 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.39□□□□□ -1.71
RPS4XP62701 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPS4XP62701 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPS4XP62701 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RPS4XP62701 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RPS4XP62701 SDAD1P1-202ENST00000524156 2051 ntBASIC4.38□□□□□ -1.71
RPS4XP62701 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RPS4XP62701 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.38□□□□□ -1.71
RPS4XP62701 MIR192-201ENST00000384915 110 ntBASIC4.38□□□□□ -1.71
RPS4XP62701 AL021331.1-201ENST00000402817 582 ntBASIC4.38□□□□□ -1.71
RPS4XP62701 RNA5SP498-201ENST00000411342 120 ntBASIC4.38□□□□□ -1.71
RPS4XP62701 AC016397.1-201ENST00000412463 242 ntBASIC4.38□□□□□ -1.71
RPS4XP62701 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.38□□□□□ -1.71
RPS4XP62701 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.38□□□□□ -1.71
RPS4XP62701 AC093414.1-201ENST00000434712 514 ntBASIC4.38□□□□□ -1.71
RPS4XP62701 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RPS4XP62701 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.38□□□□□ -1.71
RPS4XP62701 AL137845.2-201ENST00000444292 988 ntBASIC4.38□□□□□ -1.71
RPS4XP62701 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.38□□□□□ -1.71
RPS4XP62701 AC017099.1-201ENST00000448261 1028 ntBASIC4.38□□□□□ -1.71
RPS4XP62701 AL353718.1-201ENST00000451028 517 ntBASIC4.38□□□□□ -1.71
RPS4XP62701 HMGB1P5-202ENST00000451497 985 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms