Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CUL4AP1-201ENST00000514750 1863 ntBASIC4.41□□□□□ -1.7
VSX2P58304 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VSX2P58304 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VSX2P58304 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.41□□□□□ -1.7
VSX2P58304 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VSX2P58304 AC136624.1-201ENST00000400791 413 ntBASIC4.41□□□□□ -1.7
VSX2P58304 RPS3AP23-201ENST00000401762 784 ntBASIC4.41□□□□□ -1.7
VSX2P58304 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
VSX2P58304 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.41□□□□□ -1.7
VSX2P58304 AC006065.1-201ENST00000422539 802 ntBASIC4.41□□□□□ -1.7
VSX2P58304 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.41□□□□□ -1.7
VSX2P58304 CENPIP1-201ENST00000425713 902 ntBASIC4.41□□□□□ -1.7
VSX2P58304 HMGB1P32-201ENST00000425971 565 ntBASIC4.41□□□□□ -1.7
VSX2P58304 NMNAT1P2-201ENST00000435192 860 ntBASIC4.41□□□□□ -1.7
VSX2P58304 SNRPFP2-201ENST00000440710 251 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.41□□□□□ -1.7
VSX2P58304 AC009220.1-201ENST00000451614 275 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AL445433.1-201ENST00000457507 257 ntBASIC4.41□□□□□ -1.7
VSX2P58304 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.41□□□□□ -1.7
VSX2P58304 OR52A4P-201ENST00000472867 958 ntBASIC4.41□□□□□ -1.7
VSX2P58304 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.41□□□□□ -1.7
VSX2P58304 AC020890.1-201ENST00000491837 504 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AC113398.2-201ENST00000507630 558 ntBASIC4.41□□□□□ -1.7
VSX2P58304 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.41□□□□□ -1.7
VSX2P58304 AP001781.1-201ENST00000530977 207 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AC022882.1-201ENST00000532142 501 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AC107918.3-201ENST00000533272 382 ntBASIC4.41□□□□□ -1.7
VSX2P58304 GSTP1P1-201ENST00000548078 319 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.41□□□□□ -1.7
VSX2P58304 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.41□□□□□ -1.7
VSX2P58304 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VSX2P58304 AC069061.3-201ENST00000582254 823 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.41□□□□□ -1.7
VSX2P58304 AC093765.1-201ENST00000603758 881 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AL159169.2-201ENST00000610061 1269 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AC131238.1-201ENST00000617135 328 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AL359757.1-201ENST00000623176 255 ntBASIC4.41□□□□□ -1.7
VSX2P58304 AL391684.1-202ENST00000641293 1636 ntBASIC4.41□□□□□ -1.7
VSX2P58304 CR382285.2-201ENST00000624662 1495 ntBASIC4.41□□□□□ -1.7
VSX2P58304 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VSX2P58304 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VSX2P58304 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
VSX2P58304 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VSX2P58304 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
VSX2P58304 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.4□□□□□ -1.7
VSX2P58304 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.4□□□□□ -1.7
VSX2P58304 OR14L1P-202ENST00000641545 3009 ntBASIC4.4□□□□□ -1.7
VSX2P58304 LINC01109-201ENST00000603837 3081 ntBASIC4.4□□□□□ -1.7
VSX2P58304 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VSX2P58304 AL133268.1-201ENST00000405676 1401 ntBASIC4.4□□□□□ -1.7
VSX2P58304 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.4□□□□□ -1.7
VSX2P58304 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
VSX2P58304 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VSX2P58304 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
VSX2P58304 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VSX2P58304 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VSX2P58304 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VSX2P58304 RNU6-1331P-201ENST00000363658 106 ntBASIC4.4□□□□□ -1.71
VSX2P58304 MIR141-201ENST00000384975 95 ntBASIC4.4□□□□□ -1.71
VSX2P58304 AC016397.1-201ENST00000412463 242 ntBASIC4.4□□□□□ -1.71
VSX2P58304 AC013470.3-201ENST00000420252 1194 ntBASIC4.4□□□□□ -1.71
VSX2P58304 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.4□□□□□ -1.71
VSX2P58304 MTND6P18-201ENST00000439477 513 ntBASIC4.4□□□□□ -1.71
VSX2P58304 MTCO3P17-201ENST00000443775 513 ntBASIC4.4□□□□□ -1.71
VSX2P58304 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.4□□□□□ -1.71
VSX2P58304 NPM1P39-201ENST00000449818 867 ntBASIC4.4□□□□□ -1.71
VSX2P58304 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.4□□□□□ -1.71
VSX2P58304 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.4□□□□□ -1.71
VSX2P58304 OR52Y1P-201ENST00000452418 828 ntBASIC4.4□□□□□ -1.71
VSX2P58304 SCARNA10-201ENST00000459255 330 ntBASIC4.4□□□□□ -1.71
VSX2P58304 AC096741.1-201ENST00000472250 846 ntBASIC4.4□□□□□ -1.71
VSX2P58304 AGGF1P3-201ENST00000493675 1213 ntBASIC4.4□□□□□ -1.71
VSX2P58304 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.4□□□□□ -1.71
VSX2P58304 AK3P4-201ENST00000504283 583 ntBASIC4.4□□□□□ -1.71
VSX2P58304 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.4□□□□□ -1.71
VSX2P58304 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.4□□□□□ -1.71
VSX2P58304 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
VSX2P58304 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.4□□□□□ -1.71
VSX2P58304 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.4□□□□□ -1.71
VSX2P58304 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.4□□□□□ -1.71
VSX2P58304 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.4□□□□□ -1.71
VSX2P58304 AC209154.1-201ENST00000582156 337 ntBASIC4.4□□□□□ -1.71
VSX2P58304 AC020915.5-201ENST00000596836 964 ntBASIC4.4□□□□□ -1.71
VSX2P58304 RNF138P2-201ENST00000603490 592 ntBASIC4.4□□□□□ -1.71
VSX2P58304 AC008745.1-201ENST00000604064 271 ntBASIC4.4□□□□□ -1.71
VSX2P58304 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.4□□□□□ -1.71
VSX2P58304 OR7M1P-201ENST00000608946 533 ntBASIC4.4□□□□□ -1.71
VSX2P58304 AC096586.2-201ENST00000610260 441 ntBASIC4.4□□□□□ -1.71
VSX2P58304 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.4□□□□□ -1.71
VSX2P58304 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.4□□□□□ -1.71
VSX2P58304 AL049536.1-201ENST00000625043 744 ntBASIC4.4□□□□□ -1.71
VSX2P58304 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.4□□□□□ -1.71
VSX2P58304 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.4□□□□□ -1.71
VSX2P58304 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
VSX2P58304 AL132640.2-201ENST00000559968 1698 ntBASIC4.4□□□□□ -1.71
VSX2P58304 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VSX2P58304 AL672167.1-203ENST00000641299 2975 ntBASIC4.4□□□□□ -1.71
VSX2P58304 DDX18P4-201ENST00000511690 1966 ntBASIC4.4□□□□□ -1.71
VSX2P58304 MTCO1P22-201ENST00000604619 1360 ntBASIC4.4□□□□□ -1.71
VSX2P58304 AC139713.2-215ENST00000641428 5037 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms