Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC093875.1-201ENST00000623688 504 ntBASIC4.82□□□□□ -1.64
CDH13P55290 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CDH13P55290 TMEM30CP-203ENST00000637814 1035 ntBASIC4.82□□□□□ -1.64
CDH13P55290 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 NEAT1-202ENST00000501122 22743 ntBASIC4.82□□□□□ -1.64
CDH13P55290 HSPD1P11-201ENST00000508643 1702 ntBASIC4.82□□□□□ -1.64
CDH13P55290 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH13P55290 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDH13P55290 ECM1P2-201ENST00000503354 1577 ntBASIC4.82□□□□□ -1.64
CDH13P55290 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH13P55290 AC107068.1-201ENST00000563286 4218 ntBASIC4.82□□□□□ -1.64
CDH13P55290 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CDH13P55290 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CDH13P55290 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
CDH13P55290 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CDH13P55290 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH13P55290 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDH13P55290 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH13P55290 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDH13P55290 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 AL136520.1-201ENST00000600311 1322 ntBASIC4.81□□□□□ -1.64
CDH13P55290 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 SNORD56.4-201ENST00000363883 71 ntBASIC4.81□□□□□ -1.64
CDH13P55290 SNORA66-201ENST00000384792 133 ntBASIC4.81□□□□□ -1.64
CDH13P55290 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 AL035405.1-201ENST00000400795 710 ntBASIC4.81□□□□□ -1.64
CDH13P55290 TCEA1P4-201ENST00000415066 844 ntBASIC4.81□□□□□ -1.64
CDH13P55290 TRGV6-201ENST00000417928 299 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH13P55290 AC023128.2-201ENST00000420880 1223 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH13P55290 MTCO1P43-201ENST00000431831 488 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH13P55290 AL391987.1-201ENST00000441025 200 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AL158053.1-201ENST00000441503 453 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH13P55290 KNOP1P3-201ENST00000446933 426 ntBASIC4.81□□□□□ -1.64
CDH13P55290 FAR2P1-206ENST00000449736 709 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AL591623.2-201ENST00000449978 222 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AC243772.1-201ENST00000451620 410 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AC097484.1-201ENST00000471148 389 ntBASIC4.81□□□□□ -1.64
CDH13P55290 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH13P55290 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH13P55290 HMGN2P25-201ENST00000486956 268 ntBASIC4.81□□□□□ -1.64
CDH13P55290 RPS27AP16-201ENST00000492222 470 ntBASIC4.81□□□□□ -1.64
CDH13P55290 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH13P55290 AC010627.1-201ENST00000503819 1294 ntBASIC4.81□□□□□ -1.64
CDH13P55290 RFPL4AP5-201ENST00000514977 504 ntBASIC4.81□□□□□ -1.64
CDH13P55290 RN7SKP46-201ENST00000515942 234 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH13P55290 IGKV3D-34-201ENST00000522638 302 ntBASIC4.81□□□□□ -1.64
CDH13P55290 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDH13P55290 NPM1P47-201ENST00000560843 856 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AC084759.1-201ENST00000561168 290 ntBASIC4.81□□□□□ -1.64
CDH13P55290 ABI1P1-201ENST00000603375 1120 ntBASIC4.81□□□□□ -1.64
CDH13P55290 AC090525.3-201ENST00000605601 189 ntBASIC4.81□□□□□ -1.64
CDH13P55290 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH13P55290 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.81□□□□□ -1.64
CDH13P55290 uc_338.9-201ENST00000617424 182 ntBASIC4.81□□□□□ -1.64
CDH13P55290 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH13P55290 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH13P55290 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH13P55290 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH13P55290 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH13P55290 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CDH13P55290 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH13P55290 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH13P55290 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH13P55290 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 AC126323.6-202ENST00000568092 3511 ntBASIC4.8□□□□□ -1.64
CDH13P55290 AP000542.2-201ENST00000623199 6179 ntBASIC4.8□□□□□ -1.64
CDH13P55290 AC015813.6-201ENST00000624409 5808 ntBASIC4.8□□□□□ -1.64
CDH13P55290 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH13P55290 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH13P55290 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH13P55290 SNORA62.2-201ENST00000364672 152 ntBASIC4.8□□□□□ -1.64
CDH13P55290 GCNT6-201ENST00000379591 934 ntBASIC4.8□□□□□ -1.64
CDH13P55290 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH13P55290 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.8□□□□□ -1.64
CDH13P55290 AL512422.1-201ENST00000407033 553 ntBASIC4.8□□□□□ -1.64
CDH13P55290 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH13P55290 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH13P55290 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH13P55290 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.8□□□□□ -1.64
CDH13P55290 BX664727.1-201ENST00000416024 466 ntBASIC4.8□□□□□ -1.64
CDH13P55290 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH13P55290 AC048351.1-201ENST00000420064 602 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms