Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
GTF2A1P52655 OR10G5P-201ENST00000532733 358 ntBASIC4.42□□□□□ -1.7
GTF2A1P52655 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
GTF2A1P52655 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.42□□□□□ -1.7
GTF2A1P52655 MIR3186-201ENST00000577404 85 ntBASIC4.42□□□□□ -1.7
GTF2A1P52655 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.42□□□□□ -1.7
GTF2A1P52655 AC008521.2-201ENST00000591021 259 ntBASIC4.42□□□□□ -1.7
GTF2A1P52655 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.42□□□□□ -1.7
GTF2A1P52655 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.42□□□□□ -1.7
GTF2A1P52655 BMS1P7-201ENST00000602440 1052 ntBASIC4.42□□□□□ -1.7
GTF2A1P52655 AC010680.3-201ENST00000604215 520 ntBASIC4.42□□□□□ -1.7
GTF2A1P52655 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.42□□□□□ -1.7
GTF2A1P52655 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.42□□□□□ -1.7
GTF2A1P52655 AC103710.3-201ENST00000608157 948 ntBASIC4.42□□□□□ -1.7
GTF2A1P52655 AC048341.3-201ENST00000619323 491 ntBASIC4.42□□□□□ -1.7
GTF2A1P52655 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
GTF2A1P52655 AC107021.2-201ENST00000567714 2095 ntBASIC4.42□□□□□ -1.7
GTF2A1P52655 PRO1804-201ENST00000623780 2050 ntBASIC4.42□□□□□ -1.7
GTF2A1P52655 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
GTF2A1P52655 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GTF2A1P52655 PHKBP1-201ENST00000450951 1951 ntBASIC4.42□□□□□ -1.7
GTF2A1P52655 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.42□□□□□ -1.7
GTF2A1P52655 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
GTF2A1P52655 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GTF2A1P52655 RNF19BPY-201ENST00000458209 1550 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.41□□□□□ -1.7
GTF2A1P52655 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.41□□□□□ -1.7
GTF2A1P52655 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GTF2A1P52655 RNA5SP151-201ENST00000365632 117 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 AL353625.1-202ENST00000366273 571 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.41□□□□□ -1.7
GTF2A1P52655 MIR600-201ENST00000385007 98 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 RNU2-50P-201ENST00000410494 143 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.41□□□□□ -1.7
GTF2A1P52655 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.41□□□□□ -1.7
GTF2A1P52655 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.41□□□□□ -1.7
GTF2A1P52655 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.41□□□□□ -1.7
GTF2A1P52655 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.41□□□□□ -1.7
GTF2A1P52655 AC022431.1-201ENST00000450941 438 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.41□□□□□ -1.7
GTF2A1P52655 AL133445.1-201ENST00000467051 452 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.41□□□□□ -1.7
GTF2A1P52655 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.41□□□□□ -1.7
GTF2A1P52655 AC015864.1-201ENST00000496512 544 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.41□□□□□ -1.7
GTF2A1P52655 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.41□□□□□ -1.7
GTF2A1P52655 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.41□□□□□ -1.7
GTF2A1P52655 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.41□□□□□ -1.7
GTF2A1P52655 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.41□□□□□ -1.7
GTF2A1P52655 AC126177.5-201ENST00000549599 178 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.41□□□□□ -1.7
GTF2A1P52655 AC135626.1-201ENST00000556983 435 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.41□□□□□ -1.7
GTF2A1P52655 SUGT1P3-202ENST00000604259 383 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 AC009779.8-202ENST00000607990 932 ntBASIC4.41□□□□□ -1.7
GTF2A1P52655 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.41□□□□□ -1.7
GTF2A1P52655 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.41□□□□□ -1.7
GTF2A1P52655 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.41□□□□□ -1.7
GTF2A1P52655 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.41□□□□□ -1.7
GTF2A1P52655 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.41□□□□□ -1.7
GTF2A1P52655 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.41□□□□□ -1.7
GTF2A1P52655 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GTF2A1P52655 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GTF2A1P52655 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GTF2A1P52655 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GTF2A1P52655 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
GTF2A1P52655 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GTF2A1P52655 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GTF2A1P52655 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
GTF2A1P52655 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GTF2A1P52655 SNORA70.10-201ENST00000384515 134 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 RNU6-328P-201ENST00000390887 106 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 SNORA77-201ENST00000408716 125 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.4□□□□□ -1.71
GTF2A1P52655 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.4□□□□□ -1.71
GTF2A1P52655 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.4□□□□□ -1.71
GTF2A1P52655 AC013410.1-201ENST00000436223 1232 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 CYCSP12-201ENST00000437729 300 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.4□□□□□ -1.71
GTF2A1P52655 TPTE2P3-201ENST00000441562 1189 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 RPS26P41-201ENST00000450370 284 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 Z92846.1-201ENST00000456203 268 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.4□□□□□ -1.71
GTF2A1P52655 AC087385.1-201ENST00000475062 312 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.4□□□□□ -1.71
GTF2A1P52655 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.4□□□□□ -1.71
GTF2A1P52655 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.4□□□□□ -1.71
GTF2A1P52655 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.4□□□□□ -1.71
GTF2A1P52655 GTF2F2P1-201ENST00000511083 675 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 IGKV2-23-201ENST00000518729 323 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 PDCL2P2-201ENST00000533651 189 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 TOMM20P1-201ENST00000534518 427 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 AC134349.2-201ENST00000535136 910 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.4□□□□□ -1.71
GTF2A1P52655 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
GTF2A1P52655 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.4□□□□□ -1.71
GTF2A1P52655 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GTF2A1P52655 MIR5047-201ENST00000579212 100 ntBASIC4.4□□□□□ -1.71
GTF2A1P52655 MIR5010-201ENST00000582846 120 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms