Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.51□□□□□ -1.69
RPA3P35244 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.51□□□□□ -1.69
RPA3P35244 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.51□□□□□ -1.69
RPA3P35244 AC067838.1-201ENST00000606064 577 ntBASIC4.51□□□□□ -1.69
RPA3P35244 BX323046.1-201ENST00000610145 535 ntBASIC4.51□□□□□ -1.69
RPA3P35244 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPA3P35244 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RPA3P35244 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPA3P35244 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPA3P35244 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPA3P35244 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.5□□□□□ -1.69
RPA3P35244 ZNF137P-201ENST00000456718 1920 ntBASIC4.5□□□□□ -1.69
RPA3P35244 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.5□□□□□ -1.69
RPA3P35244 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPA3P35244 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPA3P35244 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.5□□□□□ -1.69
RPA3P35244 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPA3P35244 AL672167.2-201ENST00000377164 879 ntBASIC4.5□□□□□ -1.69
RPA3P35244 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RPA3P35244 MIR93-201ENST00000385024 80 ntBASIC4.5□□□□□ -1.69
RPA3P35244 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.5□□□□□ -1.69
RPA3P35244 VDAC2P1-201ENST00000399358 958 ntBASIC4.5□□□□□ -1.69
RPA3P35244 RPS24P12-201ENST00000402084 394 ntBASIC4.5□□□□□ -1.69
RPA3P35244 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.5□□□□□ -1.69
RPA3P35244 SNORA79B-201ENST00000410557 148 ntBASIC4.5□□□□□ -1.69
RPA3P35244 RN7SKP106-201ENST00000410832 272 ntBASIC4.5□□□□□ -1.69
RPA3P35244 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.5□□□□□ -1.69
RPA3P35244 RAD23BP1-201ENST00000421404 1227 ntBASIC4.5□□□□□ -1.69
RPA3P35244 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.5□□□□□ -1.69
RPA3P35244 SCARNA10-201ENST00000459255 330 ntBASIC4.5□□□□□ -1.69
RPA3P35244 RPL5P30-201ENST00000465511 891 ntBASIC4.5□□□□□ -1.69
RPA3P35244 AC111000.5-201ENST00000506559 1178 ntBASIC4.5□□□□□ -1.69
RPA3P35244 OR51K1P-201ENST00000510214 950 ntBASIC4.5□□□□□ -1.69
RPA3P35244 AC006499.6-201ENST00000511169 607 ntBASIC4.5□□□□□ -1.69
RPA3P35244 RNA5SP360-201ENST00000516555 118 ntBASIC4.5□□□□□ -1.69
RPA3P35244 MYL12AP1-201ENST00000518490 515 ntBASIC4.5□□□□□ -1.69
RPA3P35244 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.5□□□□□ -1.69
RPA3P35244 AC124068.1-201ENST00000563131 678 ntBASIC4.5□□□□□ -1.69
RPA3P35244 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RPA3P35244 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.5□□□□□ -1.69
RPA3P35244 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.5□□□□□ -1.69
RPA3P35244 AL160290.3-201ENST00000604869 165 ntBASIC4.5□□□□□ -1.69
RPA3P35244 AC116651.1-201ENST00000609724 556 ntBASIC4.5□□□□□ -1.69
RPA3P35244 AC004948.1-201ENST00000609858 672 ntBASIC4.5□□□□□ -1.69
RPA3P35244 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.5□□□□□ -1.69
RPA3P35244 U3.53-201ENST00000628922 216 ntBASIC4.5□□□□□ -1.69
RPA3P35244 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.5□□□□□ -1.69
RPA3P35244 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPA3P35244 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.5□□□□□ -1.69
RPA3P35244 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.5□□□□□ -1.69
RPA3P35244 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPA3P35244 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.49□□□□□ -1.69
RPA3P35244 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.49□□□□□ -1.69
RPA3P35244 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPA3P35244 AC073429.2-201ENST00000569694 1444 ntBASIC4.49□□□□□ -1.69
RPA3P35244 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPA3P35244 AC103591.2-201ENST00000265259 766 ntBASIC4.49□□□□□ -1.69
RPA3P35244 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RPA3P35244 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
RPA3P35244 SNORA81-201ENST00000408493 178 ntBASIC4.49□□□□□ -1.69
RPA3P35244 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 AC114982.2-201ENST00000461396 358 ntBASIC4.49□□□□□ -1.69
RPA3P35244 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.49□□□□□ -1.69
RPA3P35244 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.49□□□□□ -1.69
RPA3P35244 IFITM8P-201ENST00000522529 394 ntBASIC4.49□□□□□ -1.69
RPA3P35244 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.49□□□□□ -1.69
RPA3P35244 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.49□□□□□ -1.69
RPA3P35244 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.49□□□□□ -1.69
RPA3P35244 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.49□□□□□ -1.69
RPA3P35244 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.49□□□□□ -1.69
RPA3P35244 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.49□□□□□ -1.69
RPA3P35244 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.49□□□□□ -1.69
RPA3P35244 BPIFA4P-203ENST00000603168 689 ntBASIC4.49□□□□□ -1.69
RPA3P35244 AC008638.3-201ENST00000603341 463 ntBASIC4.49□□□□□ -1.69
RPA3P35244 AL031666.3-201ENST00000609320 1006 ntBASIC4.49□□□□□ -1.69
RPA3P35244 AL159169.2-201ENST00000610061 1269 ntBASIC4.49□□□□□ -1.69
RPA3P35244 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.49□□□□□ -1.69
RPA3P35244 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.49□□□□□ -1.69
RPA3P35244 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPA3P35244 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPA3P35244 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPA3P35244 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RPA3P35244 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPA3P35244 KPNA2P2-201ENST00000419546 1489 ntBASIC4.49□□□□□ -1.69
RPA3P35244 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPA3P35244 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.49□□□□□ -1.69
RPA3P35244 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.49□□□□□ -1.69
RPA3P35244 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.49□□□□□ -1.69
RPA3P35244 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPA3P35244 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPA3P35244 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms