Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC138409.2-202ENST00000507274 458 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.81□□□□□ -1.8
COL8A2P25067 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.81□□□□□ -1.8
COL8A2P25067 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.81□□□□□ -1.8
COL8A2P25067 ADAD1P2-201ENST00000588476 646 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 AC130352.1-201ENST00000602979 661 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 AC090948.1-201ENST00000607464 549 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.81□□□□□ -1.8
COL8A2P25067 MIR8069-1-201ENST00000616627 86 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 MIR8069-2-201ENST00000621412 86 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.81□□□□□ -1.8
COL8A2P25067 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.81□□□□□ -1.8
COL8A2P25067 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
COL8A2P25067 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.81□□□□□ -1.8
COL8A2P25067 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL8A2P25067 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL8A2P25067 CCT8P1-201ENST00000413611 1657 ntBASIC3.81□□□□□ -1.8
COL8A2P25067 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.81□□□□□ -1.8
COL8A2P25067 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.81□□□□□ -1.8
COL8A2P25067 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL8A2P25067 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL8A2P25067 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL8A2P25067 AC010300.1-201ENST00000600671 5134 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL8A2P25067 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL8A2P25067 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL8A2P25067 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL8A2P25067 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
COL8A2P25067 AC125257.1-201ENST00000560400 2930 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COL8A2P25067 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL8A2P25067 RNU1-83P-201ENST00000363426 164 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 RNA5SP509-201ENST00000364577 119 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 FABP12P1-201ENST00000401911 322 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.8□□□□□ -1.8
COL8A2P25067 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.8□□□□□ -1.8
COL8A2P25067 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.8□□□□□ -1.8
COL8A2P25067 EIF2S2P3-201ENST00000428356 999 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 RPS29P17-201ENST00000430795 166 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.8□□□□□ -1.8
COL8A2P25067 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.8□□□□□ -1.8
COL8A2P25067 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.8□□□□□ -1.8
COL8A2P25067 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 FHP1-201ENST00000442741 703 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 RPL7L1P1-201ENST00000448259 785 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.8□□□□□ -1.8
COL8A2P25067 AC012671.1-201ENST00000451912 203 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 RPS6P2-201ENST00000454208 705 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 RPL23AP37-201ENST00000479658 549 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.8□□□□□ -1.8
COL8A2P25067 RPS27AP16-201ENST00000492222 470 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.8□□□□□ -1.8
COL8A2P25067 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.8□□□□□ -1.8
COL8A2P25067 ARL4AP1-201ENST00000503220 705 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AC083829.1-201ENST00000503756 657 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AC112184.1-201ENST00000505179 312 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AC010476.1-201ENST00000519111 851 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.8□□□□□ -1.8
COL8A2P25067 PARP1P2-201ENST00000556806 195 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.8□□□□□ -1.8
COL8A2P25067 AC020634.1-201ENST00000608701 549 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AC006338.2-201ENST00000616864 791 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AL121890.3-201ENST00000618494 516 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.8□□□□□ -1.8
COL8A2P25067 AC010809.3-201ENST00000621310 641 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 AC005086.4-201ENST00000623065 213 ntBASIC3.8□□□□□ -1.8
COL8A2P25067 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL8A2P25067 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.8□□□□□ -1.8
COL8A2P25067 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL8A2P25067 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
COL8A2P25067 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL8A2P25067 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
COL8A2P25067 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
COL8A2P25067 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL8A2P25067 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
COL8A2P25067 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.79□□□□□ -1.8
COL8A2P25067 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.79□□□□□ -1.8
COL8A2P25067 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.79□□□□□ -1.8
COL8A2P25067 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL8A2P25067 RNU1-130P-201ENST00000363930 160 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
COL8A2P25067 RNU6-233P-201ENST00000410845 141 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 RPL21P108-201ENST00000413857 481 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 RPL21P43-201ENST00000425440 472 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.79□□□□□ -1.8
COL8A2P25067 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.79□□□□□ -1.8
COL8A2P25067 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.79□□□□□ -1.8
COL8A2P25067 AC002553.2-201ENST00000453217 340 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
COL8A2P25067 AC022795.1-201ENST00000473808 480 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 NIP7P2-201ENST00000485801 544 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 AC020890.1-201ENST00000491837 504 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 RPS4XP18-201ENST00000495480 763 ntBASIC3.79□□□□□ -1.8
COL8A2P25067 AC106806.2-201ENST00000509365 500 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms