Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RN7SL717P-201ENST00000478343 297 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
ERCC3P19447 AC112198.1-201ENST00000505369 1220 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 LTV1P1-201ENST00000510683 1237 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ERCC3P19447 RNU6-1261P-201ENST00000517194 104 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC3P19447 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC3P19447 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC3P19447 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC3P19447 AC073916.1-201ENST00000545095 130 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.04□□□□□ -1.28
ERCC3P19447 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC3P19447 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC3P19447 SULT1C2P2-201ENST00000562517 294 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AP005262.1-201ENST00000582646 997 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC3P19447 PSMA6P4-201ENST00000603247 718 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AL512624.1-201ENST00000613638 469 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC3P19447 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC3P19447 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 AC092162.3-201ENST00000624511 1624 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC3P19447 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC3P19447 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC3P19447 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
ERCC3P19447 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ERCC3P19447 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC3P19447 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC3P19447 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC3P19447 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.03□□□□□ -1.28
ERCC3P19447 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ERCC3P19447 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC3P19447 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
ERCC3P19447 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ERCC3P19447 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
ERCC3P19447 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.03□□□□□ -1.28
ERCC3P19447 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC3P19447 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
ERCC3P19447 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC3P19447 U3.4-201ENST00000363352 213 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
ERCC3P19447 EI24P3-201ENST00000399046 1062 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 RNU2-65P-201ENST00000410162 185 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 RNU6-648P-201ENST00000410190 107 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 PRELID3BP11-201ENST00000414230 479 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 MTCO3P41-201ENST00000414801 328 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 FCF1P2-201ENST00000415284 583 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC7.03□□□□□ -1.28
ERCC3P19447 AC113412.1-201ENST00000425840 504 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 TRAPPC2P5-201ENST00000426293 308 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC3P19447 AC124944.2-201ENST00000429866 1242 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC3P19447 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC7.03□□□□□ -1.28
ERCC3P19447 AC023141.9-201ENST00000458734 412 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 SETP11-201ENST00000473027 690 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 RN7SL165P-201ENST00000477476 291 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 RN7SL284P-201ENST00000498823 275 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC3P19447 MTATP6P22-201ENST00000507369 598 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC3P19447 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.03□□□□□ -1.28
ERCC3P19447 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC3P19447 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC3P19447 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC3P19447 AC079600.1-201ENST00000550326 297 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC3P19447 TRAV15-201ENST00000556680 249 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 ZNF322P1-201ENST00000568013 1209 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.03□□□□□ -1.28
ERCC3P19447 MTCYBP22-201ENST00000603788 447 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC3P19447 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC3P19447 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.03□□□□□ -1.28
ERCC3P19447 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC3P19447 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC3P19447 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC3P19447 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.03□□□□□ -1.28
ERCC3P19447 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.03□□□□□ -1.28
ERCC3P19447 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC3P19447 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC3P19447 AC022031.1-201ENST00000585985 2593 ntBASIC7.03□□□□□ -1.28
ERCC3P19447 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
ERCC3P19447 AC016745.2-201ENST00000608834 3443 ntBASIC7.02□□□□□ -1.28
ERCC3P19447 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.02□□□□□ -1.28
ERCC3P19447 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC3P19447 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
ERCC3P19447 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
ERCC3P19447 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms