Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DOBP13765 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DOBP13765 AP000542.2-201ENST00000623199 6179 ntBASIC4.55□□□□□ -1.68
HLA-DOBP13765 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DOBP13765 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DOBP13765 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DOBP13765 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DOBP13765 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.55□□□□□ -1.68
HLA-DOBP13765 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 RNU6-906P-201ENST00000384700 70 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 MIR142-201ENST00000384835 87 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AP000534.2-201ENST00000412729 568 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 DPPA2P2-201ENST00000418220 897 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC234781.4-201ENST00000419384 244 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 MTND2P16-201ENST00000419987 799 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC092634.2-201ENST00000428146 1010 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 COX6CP13-201ENST00000428703 226 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 FO393419.3-201ENST00000428741 282 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 CNOT7P2-201ENST00000441051 832 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 HSFY3P-201ENST00000444242 1191 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AL591719.1-201ENST00000444669 744 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 PSMC1P13-201ENST00000458195 985 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 RPS18P6-201ENST00000476880 458 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 RN7SL30P-201ENST00000488416 306 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC010627.1-201ENST00000503819 1294 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 LRRC6P1-201ENST00000532188 885 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AP002373.2-201ENST00000541631 1060 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC004825.1-201ENST00000555068 586 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC006349.1-201ENST00000555526 235 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AL049844.2-201ENST00000604280 628 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 ELOCP35-201ENST00000604289 336 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC018695.5-201ENST00000605872 315 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC099494.2-201ENST00000623371 978 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 AC068057.2-201ENST00000624047 895 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 CDC27P2-201ENST00000425026 1922 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.54□□□□□ -1.68
HLA-DOBP13765 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DOBP13765 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DOBP13765 AL121950.1-201ENST00000624993 2077 ntBASIC4.53□□□□□ -1.68
HLA-DOBP13765 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DOBP13765 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DOBP13765 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DOBP13765 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DOBP13765 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DOBP13765 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DOBP13765 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DOBP13765 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DOBP13765 MIR223-201ENST00000385204 110 ntBASIC4.53□□□□□ -1.68
HLA-DOBP13765 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DOBP13765 RN7SKP229-201ENST00000410465 302 ntBASIC4.53□□□□□ -1.68
HLA-DOBP13765 AC211486.3-201ENST00000412694 621 ntBASIC4.53□□□□□ -1.68
HLA-DOBP13765 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DOBP13765 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DOBP13765 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DOBP13765 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DOBP13765 AL355433.1-201ENST00000422804 300 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms