Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CCT8P1-201ENST00000413611 1657 ntBASIC5.03□□□□□ -1.6
PCNAP12004 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCNAP12004 RNA5SP132-201ENST00000364725 118 ntBASIC5.03□□□□□ -1.6
PCNAP12004 RNU6-452P-201ENST00000384406 107 ntBASIC5.03□□□□□ -1.6
PCNAP12004 SNORA67-201ENST00000384423 137 ntBASIC5.03□□□□□ -1.6
PCNAP12004 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCNAP12004 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.03□□□□□ -1.6
PCNAP12004 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.03□□□□□ -1.6
PCNAP12004 RN7SKP222-201ENST00000410651 315 ntBASIC5.03□□□□□ -1.6
PCNAP12004 EIF4A1P3-201ENST00000411521 244 ntBASIC5.03□□□□□ -1.6
PCNAP12004 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.03□□□□□ -1.6
PCNAP12004 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.03□□□□□ -1.6
PCNAP12004 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.03□□□□□ -1.6
PCNAP12004 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCNAP12004 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.03□□□□□ -1.6
PCNAP12004 RPS4XP16-201ENST00000427198 791 ntBASIC5.03□□□□□ -1.6
PCNAP12004 AL121776.1-201ENST00000429337 372 ntBASIC5.03□□□□□ -1.6
PCNAP12004 MTCO1P52-201ENST00000433928 531 ntBASIC5.03□□□□□ -1.6
PCNAP12004 RPS29P10-201ENST00000439197 166 ntBASIC5.03□□□□□ -1.6
PCNAP12004 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.03□□□□□ -1.6
PCNAP12004 PTMAP3-201ENST00000447474 330 ntBASIC5.03□□□□□ -1.6
PCNAP12004 AL009048.1-201ENST00000450437 298 ntBASIC5.03□□□□□ -1.6
PCNAP12004 DNAJB5P1-201ENST00000454004 806 ntBASIC5.03□□□□□ -1.6
PCNAP12004 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.03□□□□□ -1.6
PCNAP12004 AC006427.1-201ENST00000514359 712 ntBASIC5.03□□□□□ -1.6
PCNAP12004 BX510359.5-201ENST00000515651 304 ntBASIC5.03□□□□□ -1.6
PCNAP12004 AC012400.1-201ENST00000518452 381 ntBASIC5.03□□□□□ -1.6
PCNAP12004 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.03□□□□□ -1.6
PCNAP12004 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCNAP12004 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.03□□□□□ -1.6
PCNAP12004 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCNAP12004 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.03□□□□□ -1.6
PCNAP12004 AL049830.4-201ENST00000555149 351 ntBASIC5.03□□□□□ -1.6
PCNAP12004 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCNAP12004 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.03□□□□□ -1.6
PCNAP12004 AC022884.2-201ENST00000578535 580 ntBASIC5.03□□□□□ -1.6
PCNAP12004 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCNAP12004 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.03□□□□□ -1.6
PCNAP12004 AL022067.1-201ENST00000602426 454 ntBASIC5.03□□□□□ -1.6
PCNAP12004 AC011374.2-201ENST00000607135 526 ntBASIC5.03□□□□□ -1.6
PCNAP12004 AC009704.2-201ENST00000618739 483 ntBASIC5.03□□□□□ -1.6
PCNAP12004 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.03□□□□□ -1.6
PCNAP12004 AC008993.2-201ENST00000631744 806 ntBASIC5.03□□□□□ -1.6
PCNAP12004 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.03□□□□□ -1.6
PCNAP12004 AC083865.1-201ENST00000636634 831 ntBASIC5.03□□□□□ -1.6
PCNAP12004 AL590396.4-201ENST00000636779 956 ntBASIC5.03□□□□□ -1.6
PCNAP12004 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.03□□□□□ -1.6
PCNAP12004 AC000374.1-201ENST00000434698 1745 ntBASIC5.03□□□□□ -1.6
PCNAP12004 HSPA8P17-201ENST00000427029 1382 ntBASIC5.03□□□□□ -1.6
PCNAP12004 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PCNAP12004 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCNAP12004 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PCNAP12004 AL132640.2-201ENST00000559968 1698 ntBASIC5.02□□□□□ -1.61
PCNAP12004 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PCNAP12004 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.02□□□□□ -1.61
PCNAP12004 AC005294.1-201ENST00000355509 281 ntBASIC5.02□□□□□ -1.61
PCNAP12004 RNU5E-10P-201ENST00000363506 118 ntBASIC5.02□□□□□ -1.61
PCNAP12004 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PCNAP12004 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCNAP12004 MIR143-201ENST00000385300 106 ntBASIC5.02□□□□□ -1.61
PCNAP12004 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PCNAP12004 AL359643.1-201ENST00000404109 423 ntBASIC5.02□□□□□ -1.61
PCNAP12004 UBE2V1P11-201ENST00000411559 285 ntBASIC5.02□□□□□ -1.61
PCNAP12004 UBE2V1P9-201ENST00000414760 368 ntBASIC5.02□□□□□ -1.61
PCNAP12004 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.02□□□□□ -1.61
PCNAP12004 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.02□□□□□ -1.61
PCNAP12004 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.02□□□□□ -1.61
PCNAP12004 AC000041.1-201ENST00000439655 175 ntBASIC5.02□□□□□ -1.61
PCNAP12004 YWHAZP2-201ENST00000440317 728 ntBASIC5.02□□□□□ -1.61
PCNAP12004 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.02□□□□□ -1.61
PCNAP12004 SPRYD7P1-201ENST00000443861 570 ntBASIC5.02□□□□□ -1.61
PCNAP12004 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.02□□□□□ -1.61
PCNAP12004 AC008280.2-201ENST00000455473 307 ntBASIC5.02□□□□□ -1.61
PCNAP12004 RPS4XP1-201ENST00000482189 787 ntBASIC5.02□□□□□ -1.61
PCNAP12004 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.02□□□□□ -1.61
PCNAP12004 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.02□□□□□ -1.61
PCNAP12004 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.02□□□□□ -1.61
PCNAP12004 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.02□□□□□ -1.61
PCNAP12004 AC096571.1-202ENST00000506634 735 ntBASIC5.02□□□□□ -1.61
PCNAP12004 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCNAP12004 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.02□□□□□ -1.61
PCNAP12004 RNU6-276P-201ENST00000516114 96 ntBASIC5.02□□□□□ -1.61
PCNAP12004 AC010376.1-201ENST00000522101 334 ntBASIC5.02□□□□□ -1.61
PCNAP12004 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.02□□□□□ -1.61
PCNAP12004 PDCD5P1-201ENST00000543528 309 ntBASIC5.02□□□□□ -1.61
PCNAP12004 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.02□□□□□ -1.61
PCNAP12004 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCNAP12004 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCNAP12004 AC012146.2-201ENST00000576545 416 ntBASIC5.02□□□□□ -1.61
PCNAP12004 AC008814.1-201ENST00000603797 406 ntBASIC5.02□□□□□ -1.61
PCNAP12004 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.02□□□□□ -1.61
PCNAP12004 AL669942.2-201ENST00000620352 697 ntBASIC5.02□□□□□ -1.61
PCNAP12004 AP001002.2-201ENST00000625137 386 ntBASIC5.02□□□□□ -1.61
PCNAP12004 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.02□□□□□ -1.61
PCNAP12004 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
PCNAP12004 AC009452.1-201ENST00000640823 606 ntBASIC5.02□□□□□ -1.61
PCNAP12004 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCNAP12004 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.02□□□□□ -1.61
PCNAP12004 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCNAP12004 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms