Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RN7SL319P-201ENST00000480656 221 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 PPIAP19-201ENST00000486414 492 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AK6-203ENST00000502819 743 ntTSL 5 BASIC3.46□□□□□ -1.86
CXCL1P09341 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL1P09341 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.46□□□□□ -1.86
CXCL1P09341 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.46□□□□□ -1.86
CXCL1P09341 snoU109.6-201ENST00000516831 118 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 RNU6-943P-201ENST00000516960 98 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AC005363.1-201ENST00000530779 351 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL1P09341 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL1P09341 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.46□□□□□ -1.86
CXCL1P09341 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CXCL1P09341 MIR5699-201ENST00000578903 90 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.46□□□□□ -1.86
CXCL1P09341 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.46□□□□□ -1.86
CXCL1P09341 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.46□□□□□ -1.86
CXCL1P09341 MIR6780B-201ENST00000610307 79 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AC126915.2-201ENST00000610957 190 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.46□□□□□ -1.86
CXCL1P09341 OR52B5P-202ENST00000641118 1110 ntBASIC3.46□□□□□ -1.86
CXCL1P09341 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.46□□□□□ -1.86
CXCL1P09341 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.46□□□□□ -1.86
CXCL1P09341 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CXCL1P09341 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CXCL1P09341 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.46□□□□□ -1.86
CXCL1P09341 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.46□□□□□ -1.86
CXCL1P09341 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL1P09341 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL1P09341 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL1P09341 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.45□□□□□ -1.86
CXCL1P09341 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.45□□□□□ -1.86
CXCL1P09341 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL1P09341 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL1P09341 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
CXCL1P09341 MIR423-201ENST00000362201 94 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.45□□□□□ -1.86
CXCL1P09341 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.45□□□□□ -1.86
CXCL1P09341 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.45□□□□□ -1.86
CXCL1P09341 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 AC062016.2-201ENST00000420950 676 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 AL590609.2-201ENST00000421430 368 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.45□□□□□ -1.86
CXCL1P09341 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.45□□□□□ -1.86
CXCL1P09341 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.45□□□□□ -1.86
CXCL1P09341 YRDCP3-201ENST00000456507 480 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 RPSAP39-201ENST00000467439 883 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC3.45□□□□□ -1.86
CXCL1P09341 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CXCL1P09341 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.45□□□□□ -1.86
CXCL1P09341 SNRPCP2-201ENST00000504370 475 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 PGBD4P4-201ENST00000509673 613 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 RNA5SP143-201ENST00000516936 115 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.45□□□□□ -1.86
CXCL1P09341 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.45□□□□□ -1.86
CXCL1P09341 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.45□□□□□ -1.86
CXCL1P09341 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL1P09341 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.45□□□□□ -1.86
CXCL1P09341 MIR5010-201ENST00000582846 120 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.45□□□□□ -1.86
CXCL1P09341 AC090181.2-201ENST00000602975 672 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 AC023813.4-201ENST00000607580 580 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 AC079395.2-201ENST00000610982 737 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 MIR486-1-201ENST00000612171 68 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 AC048341.3-201ENST00000619323 491 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL1P09341 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
CXCL1P09341 MTND4P10-201ENST00000446199 1363 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.45□□□□□ -1.86
CXCL1P09341 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL1P09341 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CXCL1P09341 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CXCL1P09341 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CXCL1P09341 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.45□□□□□ -1.86
CXCL1P09341 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.45□□□□□ -1.86
CXCL1P09341 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL1P09341 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL1P09341 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 AC099654.2-201ENST00000433031 1980 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CXCL1P09341 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.44□□□□□ -1.86
CXCL1P09341 AL031985.1-201ENST00000392713 418 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 FCF1P5-201ENST00000406490 482 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 U3.36-201ENST00000408418 213 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 RN7SKP206-201ENST00000410823 293 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.44□□□□□ -1.86
CXCL1P09341 AL645608.4-201ENST00000423619 154 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.44□□□□□ -1.86
CXCL1P09341 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.44□□□□□ -1.86
CXCL1P09341 AL356535.1-201ENST00000440335 398 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 AL133244.1-201ENST00000456007 258 ntBASIC3.44□□□□□ -1.86
CXCL1P09341 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.44□□□□□ -1.86
CXCL1P09341 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.44□□□□□ -1.86
CXCL1P09341 NARSP2-201ENST00000518524 679 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms