Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL133412.1-201ENST00000380194 2992 ntBASIC5.07□□□□□ -1.6
TPM3P06753 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM3P06753 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.07□□□□□ -1.6
TPM3P06753 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TPM3P06753 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM3P06753 RN7SKP267-201ENST00000410381 285 ntBASIC5.07□□□□□ -1.6
TPM3P06753 RPS23P10-201ENST00000416185 486 ntBASIC5.07□□□□□ -1.6
TPM3P06753 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.07□□□□□ -1.6
TPM3P06753 PRELID3BP10-201ENST00000431957 584 ntBASIC5.07□□□□□ -1.6
TPM3P06753 NDUFS5P3-201ENST00000450668 321 ntBASIC5.07□□□□□ -1.6
TPM3P06753 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM3P06753 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM3P06753 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM3P06753 RPS26P15-201ENST00000488067 348 ntBASIC5.07□□□□□ -1.6
TPM3P06753 RN7SL30P-201ENST00000488416 306 ntBASIC5.07□□□□□ -1.6
TPM3P06753 RN7SKP34-201ENST00000516142 244 ntBASIC5.07□□□□□ -1.6
TPM3P06753 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TPM3P06753 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM3P06753 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM3P06753 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
TPM3P06753 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM3P06753 AC009163.6-201ENST00000612367 342 ntBASIC5.07□□□□□ -1.6
TPM3P06753 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM3P06753 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM3P06753 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TPM3P06753 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM3P06753 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.07□□□□□ -1.6
TPM3P06753 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM3P06753 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.07□□□□□ -1.6
TPM3P06753 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.07□□□□□ -1.6
TPM3P06753 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.07□□□□□ -1.6
TPM3P06753 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TPM3P06753 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TPM3P06753 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
TPM3P06753 AC135352.1-201ENST00000506173 1418 ntBASIC5.06□□□□□ -1.6
TPM3P06753 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM3P06753 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TPM3P06753 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM3P06753 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.06□□□□□ -1.6
TPM3P06753 AL391684.1-202ENST00000641293 1636 ntBASIC5.06□□□□□ -1.6
TPM3P06753 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM3P06753 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TPM3P06753 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TPM3P06753 SNORA74A-201ENST00000364089 198 ntBASIC5.06□□□□□ -1.6
TPM3P06753 MIR1282-201ENST00000408865 101 ntBASIC5.06□□□□□ -1.6
TPM3P06753 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM3P06753 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.06□□□□□ -1.6
TPM3P06753 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM3P06753 RWDD4P2-201ENST00000426392 563 ntBASIC5.06□□□□□ -1.6
TPM3P06753 AL353597.2-202ENST00000434901 373 ntBASIC5.06□□□□□ -1.6
TPM3P06753 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM3P06753 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM3P06753 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.06□□□□□ -1.6
TPM3P06753 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM3P06753 MYO5BP2-201ENST00000449815 1277 ntBASIC5.06□□□□□ -1.6
TPM3P06753 AURKAPS1-201ENST00000451805 1212 ntBASIC5.06□□□□□ -1.6
TPM3P06753 VN1R32P-201ENST00000452234 905 ntBASIC5.06□□□□□ -1.6
TPM3P06753 ISCUP1-201ENST00000454451 448 ntBASIC5.06□□□□□ -1.6
TPM3P06753 AURKAPS2-201ENST00000454983 333 ntBASIC5.06□□□□□ -1.6
TPM3P06753 AC079804.1-201ENST00000461922 436 ntBASIC5.06□□□□□ -1.6
TPM3P06753 AC026348.1-201ENST00000462549 1053 ntBASIC5.06□□□□□ -1.6
TPM3P06753 RWDD4P1-201ENST00000488019 565 ntBASIC5.06□□□□□ -1.6
TPM3P06753 RN7SKP66-201ENST00000516681 231 ntBASIC5.06□□□□□ -1.6
TPM3P06753 snoU109.6-201ENST00000516831 118 ntBASIC5.06□□□□□ -1.6
TPM3P06753 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM3P06753 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM3P06753 OR11J2P-201ENST00000555298 907 ntBASIC5.06□□□□□ -1.6
TPM3P06753 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.06□□□□□ -1.6
TPM3P06753 ADAD1P2-201ENST00000588476 646 ntBASIC5.06□□□□□ -1.6
TPM3P06753 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.06□□□□□ -1.6
TPM3P06753 AC068790.5-201ENST00000602741 355 ntBASIC5.06□□□□□ -1.6
TPM3P06753 AC078899.5-201ENST00000612475 178 ntBASIC5.06□□□□□ -1.6
TPM3P06753 MIR6861-201ENST00000618657 64 ntBASIC5.06□□□□□ -1.6
TPM3P06753 AC010809.3-201ENST00000621310 641 ntBASIC5.06□□□□□ -1.6
TPM3P06753 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM3P06753 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.06□□□□□ -1.6
TPM3P06753 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TPM3P06753 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM3P06753 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM3P06753 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM3P06753 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM3P06753 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM3P06753 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TPM3P06753 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TPM3P06753 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM3P06753 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM3P06753 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TPM3P06753 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.05□□□□□ -1.6
TPM3P06753 AC011155.1-201ENST00000316512 456 ntBASIC5.05□□□□□ -1.6
TPM3P06753 RNU1-63P-201ENST00000383902 164 ntBASIC5.05□□□□□ -1.6
TPM3P06753 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM3P06753 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM3P06753 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM3P06753 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM3P06753 CDY14P-201ENST00000431260 1014 ntBASIC5.05□□□□□ -1.6
TPM3P06753 CDY12P-201ENST00000440679 1015 ntBASIC5.05□□□□□ -1.6
TPM3P06753 CDY13P-201ENST00000445813 1015 ntBASIC5.05□□□□□ -1.6
TPM3P06753 CDY23P-201ENST00000451661 1014 ntBASIC5.05□□□□□ -1.6
TPM3P06753 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
TPM3P06753 GAPDHP56-201ENST00000506031 988 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms