Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.23□□□□□ -1.57
COL2A1P02458 HMGB3P16-201ENST00000508037 287 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 AC008958.1-201ENST00000511047 682 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.23□□□□□ -1.57
COL2A1P02458 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL2A1P02458 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.23□□□□□ -1.57
COL2A1P02458 ARF4P1-201ENST00000605447 541 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 AC005014.3-201ENST00000605985 190 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.23□□□□□ -1.57
COL2A1P02458 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
COL2A1P02458 AC004777.1-201ENST00000624317 287 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL2A1P02458 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL2A1P02458 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL2A1P02458 AL161912.2-201ENST00000565707 3007 ntBASIC5.23□□□□□ -1.57
COL2A1P02458 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.23□□□□□ -1.57
COL2A1P02458 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL2A1P02458 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL2A1P02458 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.23□□□□□ -1.57
COL2A1P02458 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL2A1P02458 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.23□□□□□ -1.57
COL2A1P02458 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL2A1P02458 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.23□□□□□ -1.57
COL2A1P02458 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL2A1P02458 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL2A1P02458 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.22□□□□□ -1.57
COL2A1P02458 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL2A1P02458 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL2A1P02458 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL2A1P02458 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL2A1P02458 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL2A1P02458 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL2A1P02458 AL137918.1-201ENST00000624542 1922 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 RNU1-83P-201ENST00000363426 164 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL2A1P02458 SEPT7P2-202ENST00000398921 823 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL2A1P02458 COX6CP15-201ENST00000426313 211 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 RSL24D1P2-201ENST00000445584 366 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.22□□□□□ -1.57
COL2A1P02458 PRSS3P4-201ENST00000453323 162 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.22□□□□□ -1.57
COL2A1P02458 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.22□□□□□ -1.57
COL2A1P02458 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.22□□□□□ -1.57
COL2A1P02458 AC105137.1-201ENST00000484355 562 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 RNU6-751P-201ENST00000516382 101 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 AP001804.2-201ENST00000533932 910 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.22□□□□□ -1.57
COL2A1P02458 AC091178.1-203ENST00000584586 279 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.22□□□□□ -1.57
COL2A1P02458 HMGB2P1-201ENST00000591146 634 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 IPO5P1-202ENST00000600039 287 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 AL391001.1-201ENST00000602747 715 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 AC099676.1-201ENST00000608886 657 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.22□□□□□ -1.57
COL2A1P02458 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.22□□□□□ -1.57
COL2A1P02458 AP001273.1-201ENST00000624493 3152 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
COL2A1P02458 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.22□□□□□ -1.57
COL2A1P02458 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.22□□□□□ -1.57
COL2A1P02458 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.22□□□□□ -1.57
COL2A1P02458 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL2A1P02458 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL2A1P02458 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL2A1P02458 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL2A1P02458 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL2A1P02458 GVINP1-202ENST00000531871 7271 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 AL158163.1-201ENST00000603915 1649 ntBASIC5.22□□□□□ -1.57
COL2A1P02458 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
COL2A1P02458 AC006971.1-201ENST00000407916 4486 ntBASIC5.21□□□□□ -1.57
COL2A1P02458 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL2A1P02458 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
COL2A1P02458 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL2A1P02458 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
COL2A1P02458 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
COL2A1P02458 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
COL2A1P02458 RNA5SP151-201ENST00000365632 117 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
COL2A1P02458 RNU1-63P-201ENST00000383902 164 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 AL161909.1-201ENST00000397390 712 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 AMZ2P2-201ENST00000406819 1057 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 AC008280.1-201ENST00000418851 412 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL2A1P02458 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.21□□□□□ -1.58
COL2A1P02458 RN7SL812P-201ENST00000493791 279 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 AL592156.1-201ENST00000508758 304 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.21□□□□□ -1.58
COL2A1P02458 RNA5SP446-201ENST00000515955 82 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 AL121834.1-201ENST00000572284 509 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 AP005901.4-201ENST00000577336 569 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 RN7SL176P-201ENST00000580352 264 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.21□□□□□ -1.58
COL2A1P02458 AC105148.1-201ENST00000604961 409 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 AP002360.3-201ENST00000607673 710 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 AL118556.2-201ENST00000614375 824 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.21□□□□□ -1.58
COL2A1P02458 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL2A1P02458 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL2A1P02458 LARP1BP1-201ENST00000506036 1359 ntBASIC5.21□□□□□ -1.58
COL2A1P02458 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms