Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC008033.1-201ENST00000216407 1162 ntBASIC4.36□□□□□ -1.71
TNFP01375 MIR331-201ENST00000362302 94 ntBASIC4.36□□□□□ -1.71
TNFP01375 RN7SKP227-201ENST00000364445 330 ntBASIC4.36□□□□□ -1.71
TNFP01375 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TNFP01375 AL356967.1-201ENST00000406305 431 ntBASIC4.36□□□□□ -1.71
TNFP01375 SNORA11F-201ENST00000408237 128 ntBASIC4.36□□□□□ -1.71
TNFP01375 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFP01375 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFP01375 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFP01375 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.36□□□□□ -1.71
TNFP01375 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFP01375 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFP01375 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TNFP01375 NUTF2P3-201ENST00000448540 384 ntBASIC4.36□□□□□ -1.71
TNFP01375 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFP01375 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFP01375 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFP01375 SNORA31.9-201ENST00000516429 84 ntBASIC4.36□□□□□ -1.71
TNFP01375 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.36□□□□□ -1.71
TNFP01375 NPM1P6-201ENST00000521088 871 ntBASIC4.36□□□□□ -1.71
TNFP01375 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.36□□□□□ -1.71
TNFP01375 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.36□□□□□ -1.71
TNFP01375 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFP01375 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TNFP01375 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TNFP01375 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TNFP01375 AC090515.3-201ENST00000560431 315 ntBASIC4.36□□□□□ -1.71
TNFP01375 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.36□□□□□ -1.71
TNFP01375 AC023043.4-201ENST00000612081 449 ntBASIC4.36□□□□□ -1.71
TNFP01375 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TNFP01375 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.36□□□□□ -1.71
TNFP01375 MAPK10-303ENST00000641324 3959 ntBASIC4.36□□□□□ -1.71
TNFP01375 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TNFP01375 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.36□□□□□ -1.71
TNFP01375 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFP01375 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.36□□□□□ -1.71
TNFP01375 NXPH1-205ENST00000602349 1953 ntBASIC4.36□□□□□ -1.71
TNFP01375 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFP01375 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFP01375 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFP01375 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TNFP01375 AC116158.1-201ENST00000560231 2129 ntBASIC4.36□□□□□ -1.71
TNFP01375 VPS35P1-201ENST00000563400 1518 ntBASIC4.36□□□□□ -1.71
TNFP01375 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFP01375 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFP01375 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TNFP01375 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFP01375 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TNFP01375 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.35□□□□□ -1.71
TNFP01375 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TNFP01375 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.35□□□□□ -1.71
TNFP01375 AMZ2P2-201ENST00000406819 1057 ntBASIC4.35□□□□□ -1.71
TNFP01375 RPL21P108-201ENST00000413857 481 ntBASIC4.35□□□□□ -1.71
TNFP01375 ARAFP1-201ENST00000422172 605 ntBASIC4.35□□□□□ -1.71
TNFP01375 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.35□□□□□ -1.71
TNFP01375 RPS26P4-201ENST00000431743 355 ntBASIC4.35□□□□□ -1.71
TNFP01375 AL132765.1-201ENST00000434165 553 ntBASIC4.35□□□□□ -1.71
TNFP01375 RPS3AP54-201ENST00000435535 734 ntBASIC4.35□□□□□ -1.71
TNFP01375 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.35□□□□□ -1.71
TNFP01375 VN1R32P-201ENST00000452234 905 ntBASIC4.35□□□□□ -1.71
TNFP01375 FTH1P2-201ENST00000466086 412 ntBASIC4.35□□□□□ -1.71
TNFP01375 AC105137.1-201ENST00000484355 562 ntBASIC4.35□□□□□ -1.71
TNFP01375 RN7SL812P-201ENST00000493791 279 ntBASIC4.35□□□□□ -1.71
TNFP01375 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.35□□□□□ -1.71
TNFP01375 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.35□□□□□ -1.71
TNFP01375 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFP01375 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFP01375 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TNFP01375 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFP01375 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.35□□□□□ -1.71
TNFP01375 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.35□□□□□ -1.71
TNFP01375 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
TNFP01375 AL390334.1-201ENST00000556395 450 ntBASIC4.35□□□□□ -1.71
TNFP01375 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.35□□□□□ -1.71
TNFP01375 AC091905.2-201ENST00000623143 306 ntBASIC4.35□□□□□ -1.71
TNFP01375 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
TNFP01375 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFP01375 TET1P1-201ENST00000426627 2301 ntBASIC4.35□□□□□ -1.71
TNFP01375 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TNFP01375 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFP01375 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TNFP01375 STX3-208ENST00000641815 3236 ntBASIC4.34□□□□□ -1.71
TNFP01375 AL731532.2-201ENST00000623542 1953 ntBASIC4.34□□□□□ -1.71
TNFP01375 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TNFP01375 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TNFP01375 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TNFP01375 RNU6-249P-201ENST00000363016 102 ntBASIC4.34□□□□□ -1.71
TNFP01375 RNA5SP366-201ENST00000365454 123 ntBASIC4.34□□□□□ -1.71
TNFP01375 RPL23AP26-201ENST00000412728 464 ntBASIC4.34□□□□□ -1.71
TNFP01375 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TNFP01375 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.34□□□□□ -1.71
TNFP01375 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.34□□□□□ -1.71
TNFP01375 RPL21P91-201ENST00000429231 479 ntBASIC4.34□□□□□ -1.71
TNFP01375 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.34□□□□□ -1.71
TNFP01375 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.34□□□□□ -1.71
TNFP01375 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.34□□□□□ -1.71
TNFP01375 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.34□□□□□ -1.71
TNFP01375 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.34□□□□□ -1.71
TNFP01375 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.34□□□□□ -1.71
TNFP01375 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms