Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.2□□□□□ -1.42
ALX3O95076 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.2□□□□□ -1.42
ALX3O95076 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.2□□□□□ -1.42
ALX3O95076 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.2□□□□□ -1.42
ALX3O95076 AC018630.1-201ENST00000541376 925 ntBASIC6.2□□□□□ -1.42
ALX3O95076 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.2□□□□□ -1.42
ALX3O95076 AC068305.2-201ENST00000550567 1205 ntBASIC6.2□□□□□ -1.42
ALX3O95076 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.2□□□□□ -1.42
ALX3O95076 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.2□□□□□ -1.42
ALX3O95076 MIR5192-201ENST00000579892 92 ntBASIC6.2□□□□□ -1.42
ALX3O95076 AC100830.2-201ENST00000581636 240 ntBASIC6.2□□□□□ -1.42
ALX3O95076 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.2□□□□□ -1.42
ALX3O95076 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.2□□□□□ -1.42
ALX3O95076 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.2□□□□□ -1.42
ALX3O95076 AL355598.1-201ENST00000604169 202 ntBASIC6.2□□□□□ -1.42
ALX3O95076 AC004908.2-201ENST00000609090 574 ntBASIC6.2□□□□□ -1.42
ALX3O95076 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.2□□□□□ -1.42
ALX3O95076 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.2□□□□□ -1.42
ALX3O95076 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.2□□□□□ -1.42
ALX3O95076 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
ALX3O95076 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
ALX3O95076 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
ALX3O95076 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.2□□□□□ -1.42
ALX3O95076 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.2□□□□□ -1.42
ALX3O95076 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.2□□□□□ -1.42
ALX3O95076 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
ALX3O95076 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.2□□□□□ -1.42
ALX3O95076 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.2□□□□□ -1.42
ALX3O95076 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 NMD3P1-201ENST00000439704 1488 ntBASIC6.2□□□□□ -1.42
ALX3O95076 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
ALX3O95076 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.2□□□□□ -1.42
ALX3O95076 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ALX3O95076 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.2□□□□□ -1.42
ALX3O95076 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.19□□□□□ -1.42
ALX3O95076 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
ALX3O95076 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.19□□□□□ -1.42
ALX3O95076 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.19□□□□□ -1.42
ALX3O95076 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 SAMMSON-203ENST00000641005 2168 ntBASIC6.19□□□□□ -1.42
ALX3O95076 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
ALX3O95076 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 RNA5SP260-201ENST00000363849 111 ntBASIC6.19□□□□□ -1.42
ALX3O95076 RNU6-809P-201ENST00000384461 107 ntBASIC6.19□□□□□ -1.42
ALX3O95076 Y_RNA.579-201ENST00000390939 94 ntBASIC6.19□□□□□ -1.42
ALX3O95076 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 PTMAP8-201ENST00000397729 342 ntBASIC6.19□□□□□ -1.42
ALX3O95076 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.19□□□□□ -1.42
ALX3O95076 SNORA11B-201ENST00000408175 129 ntBASIC6.19□□□□□ -1.42
ALX3O95076 AL450992.3-201ENST00000413192 568 ntBASIC6.19□□□□□ -1.42
ALX3O95076 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.19□□□□□ -1.42
ALX3O95076 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.19□□□□□ -1.42
ALX3O95076 RPL24P2-201ENST00000421023 475 ntBASIC6.19□□□□□ -1.42
ALX3O95076 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.19□□□□□ -1.42
ALX3O95076 DUTP4-201ENST00000424782 475 ntBASIC6.19□□□□□ -1.42
ALX3O95076 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ALX3O95076 NIPA2P1-201ENST00000426223 976 ntBASIC6.19□□□□□ -1.42
ALX3O95076 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.19□□□□□ -1.42
ALX3O95076 NANOGP6-201ENST00000429190 847 ntBASIC6.19□□□□□ -1.42
ALX3O95076 RPL36AP53-201ENST00000432891 316 ntBASIC6.19□□□□□ -1.42
ALX3O95076 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC6.19□□□□□ -1.42
ALX3O95076 RPL7P29-201ENST00000437151 728 ntBASIC6.19□□□□□ -1.42
ALX3O95076 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.19□□□□□ -1.42
ALX3O95076 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.19□□□□□ -1.42
ALX3O95076 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.19□□□□□ -1.42
ALX3O95076 ARL2BPP10-201ENST00000446487 531 ntBASIC6.19□□□□□ -1.42
ALX3O95076 PRDX1P1-201ENST00000449329 596 ntBASIC6.19□□□□□ -1.42
ALX3O95076 TREML3P-201ENST00000457327 501 ntBASIC6.19□□□□□ -1.42
ALX3O95076 AC022730.2-201ENST00000465359 452 ntBASIC6.19□□□□□ -1.42
ALX3O95076 RPL34P22-201ENST00000468193 318 ntBASIC6.19□□□□□ -1.42
ALX3O95076 RN7SL88P-201ENST00000480166 299 ntBASIC6.19□□□□□ -1.42
ALX3O95076 MTND1P3-201ENST00000484956 952 ntBASIC6.19□□□□□ -1.42
ALX3O95076 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
ALX3O95076 KLHL2P1-201ENST00000508691 521 ntBASIC6.19□□□□□ -1.42
ALX3O95076 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.19□□□□□ -1.42
ALX3O95076 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.19□□□□□ -1.42
ALX3O95076 AC026782.1-201ENST00000512952 449 ntBASIC6.19□□□□□ -1.42
ALX3O95076 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ALX3O95076 RNU6-1334P-201ENST00000516032 105 ntBASIC6.19□□□□□ -1.42
ALX3O95076 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.19□□□□□ -1.42
ALX3O95076 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.19□□□□□ -1.42
ALX3O95076 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms