Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SSX4O60224 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSX4O60224 RNA5SP335-201ENST00000363817 110 ntBASIC4.68□□□□□ -1.66
SSX4O60224 SNORA62.2-201ENST00000364672 152 ntBASIC4.68□□□□□ -1.66
SSX4O60224 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSX4O60224 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSX4O60224 AL009179.1-201ENST00000406085 265 ntBASIC4.68□□□□□ -1.66
SSX4O60224 RN7SKP273-201ENST00000411392 314 ntBASIC4.68□□□□□ -1.66
SSX4O60224 HMGB3P31-201ENST00000413333 595 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX4O60224 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSX4O60224 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX4O60224 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.68□□□□□ -1.66
SSX4O60224 OR52B5P-201ENST00000435337 951 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 RPL12P3-201ENST00000440080 396 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AC245047.2-201ENST00000441060 530 ntBASIC4.68□□□□□ -1.66
SSX4O60224 CEACAMP7-201ENST00000444105 496 ntBASIC4.68□□□□□ -1.66
SSX4O60224 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX4O60224 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 CYCSP24-201ENST00000445119 316 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AC044797.1-201ENST00000445744 679 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 AL596266.1-201ENST00000448132 400 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 HMGB1P4-201ENST00000455362 567 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 RPS17P11-201ENST00000474297 293 ntBASIC4.68□□□□□ -1.66
SSX4O60224 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSX4O60224 AC010374.1-201ENST00000503762 1237 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 AC138938.1-201ENST00000515431 782 ntBASIC4.68□□□□□ -1.66
SSX4O60224 RNA5SP303-201ENST00000516192 130 ntBASIC4.68□□□□□ -1.66
SSX4O60224 snoU109.6-201ENST00000516831 118 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSX4O60224 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.68□□□□□ -1.66
SSX4O60224 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSX4O60224 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX4O60224 AC126177.5-201ENST00000549599 178 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX4O60224 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 MIR3691-201ENST00000578066 90 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AL158050.2-201ENST00000605336 568 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX4O60224 AC023813.4-201ENST00000607580 580 ntBASIC4.68□□□□□ -1.66
SSX4O60224 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.68□□□□□ -1.66
SSX4O60224 OR2BH1P-201ENST00000608850 864 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AC055764.2-201ENST00000610089 670 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AC126915.2-201ENST00000610957 190 ntBASIC4.68□□□□□ -1.66
SSX4O60224 AC025574.2-201ENST00000615621 514 ntBASIC4.68□□□□□ -1.66
SSX4O60224 uc_338.7-201ENST00000621834 124 ntBASIC4.68□□□□□ -1.66
SSX4O60224 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.68□□□□□ -1.66
SSX4O60224 AL356118.1-201ENST00000635272 1078 ntBASIC4.68□□□□□ -1.66
SSX4O60224 OR52B5P-202ENST00000641118 1110 ntBASIC4.68□□□□□ -1.66
SSX4O60224 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.68□□□□□ -1.66
SSX4O60224 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSX4O60224 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSX4O60224 CASC19-261ENST00000641853 1638 ntBASIC4.68□□□□□ -1.66
SSX4O60224 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSX4O60224 AP001273.1-201ENST00000624493 3152 ntBASIC4.67□□□□□ -1.66
SSX4O60224 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.67□□□□□ -1.66
SSX4O60224 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX4O60224 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX4O60224 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX4O60224 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX4O60224 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX4O60224 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX4O60224 AC017079.1-201ENST00000333650 415 ntBASIC4.67□□□□□ -1.66
SSX4O60224 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSX4O60224 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.67□□□□□ -1.66
SSX4O60224 RNU6-207P-201ENST00000384137 107 ntBASIC4.67□□□□□ -1.66
SSX4O60224 HMGB3P18-201ENST00000406327 590 ntBASIC4.67□□□□□ -1.66
SSX4O60224 TCEA1P4-201ENST00000415066 844 ntBASIC4.67□□□□□ -1.66
SSX4O60224 OR13Z1P-201ENST00000416141 834 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AC048351.1-201ENST00000420064 602 ntBASIC4.67□□□□□ -1.66
SSX4O60224 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX4O60224 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.67□□□□□ -1.66
SSX4O60224 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX4O60224 MTCO3P21-201ENST00000430791 643 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX4O60224 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX4O60224 AC105399.1-202ENST00000447303 205 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AL096803.2-201ENST00000450032 677 ntBASIC4.67□□□□□ -1.66
SSX4O60224 OTX2P1-201ENST00000450956 354 ntBASIC4.67□□□□□ -1.66
SSX4O60224 MTATP6P14-201ENST00000455189 673 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AP000797.2-201ENST00000475768 606 ntBASIC4.67□□□□□ -1.66
SSX4O60224 RN7SL222P-201ENST00000476452 299 ntBASIC4.67□□□□□ -1.66
SSX4O60224 RPL7AP6-201ENST00000477943 801 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.67□□□□□ -1.66
SSX4O60224 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSX4O60224 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.67□□□□□ -1.66
SSX4O60224 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.67□□□□□ -1.66
SSX4O60224 AC087894.1-201ENST00000538359 518 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.67□□□□□ -1.66
SSX4O60224 BLZF2P-201ENST00000553776 1130 ntBASIC4.67□□□□□ -1.66
SSX4O60224 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms