Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 CASC19-205ENST00000641013 1411 ntBASIC6.66□□□□□ -1.34
SOX1O00570 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.66□□□□□ -1.34
SOX1O00570 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX1O00570 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SOX1O00570 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 CDY7P-201ENST00000429883 1604 ntBASIC6.65□□□□□ -1.34
SOX1O00570 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SOX1O00570 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX1O00570 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX1O00570 RNA5SP500-201ENST00000364486 119 ntBASIC6.65□□□□□ -1.34
SOX1O00570 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SOX1O00570 MIR223-201ENST00000385204 110 ntBASIC6.65□□□□□ -1.34
SOX1O00570 MIR16-1-201ENST00000385271 89 ntBASIC6.65□□□□□ -1.34
SOX1O00570 RNU6-244P-201ENST00000391028 104 ntBASIC6.65□□□□□ -1.34
SOX1O00570 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SOX1O00570 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 RPL35AP31-201ENST00000418340 337 ntBASIC6.65□□□□□ -1.34
SOX1O00570 GAPDHP49-201ENST00000421421 961 ntBASIC6.65□□□□□ -1.34
SOX1O00570 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.65□□□□□ -1.34
SOX1O00570 ZYG11AP1-201ENST00000430329 837 ntBASIC6.65□□□□□ -1.34
SOX1O00570 MTND5P14-201ENST00000441481 1267 ntBASIC6.65□□□□□ -1.34
SOX1O00570 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.65□□□□□ -1.34
SOX1O00570 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 COX6CP18-201ENST00000448769 222 ntBASIC6.65□□□□□ -1.34
SOX1O00570 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX1O00570 RN7SL172P-201ENST00000460535 303 ntBASIC6.65□□□□□ -1.34
SOX1O00570 AC092865.4-201ENST00000477936 615 ntBASIC6.65□□□□□ -1.34
SOX1O00570 RPS4XP1-201ENST00000482189 787 ntBASIC6.65□□□□□ -1.34
SOX1O00570 RN7SL547P-201ENST00000490793 290 ntBASIC6.65□□□□□ -1.34
SOX1O00570 RPL15P21-201ENST00000495592 567 ntBASIC6.65□□□□□ -1.34
SOX1O00570 NENFP3-201ENST00000503735 313 ntBASIC6.65□□□□□ -1.34
SOX1O00570 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.65□□□□□ -1.34
SOX1O00570 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.65□□□□□ -1.34
SOX1O00570 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.65□□□□□ -1.34
SOX1O00570 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX1O00570 OR6C73P-201ENST00000546432 358 ntBASIC6.65□□□□□ -1.34
SOX1O00570 AC123904.3-201ENST00000547218 814 ntBASIC6.65□□□□□ -1.34
SOX1O00570 AC079075.1-201ENST00000559543 878 ntBASIC6.65□□□□□ -1.34
SOX1O00570 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SOX1O00570 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.65□□□□□ -1.34
SOX1O00570 AL133457.1-201ENST00000564251 987 ntBASIC6.65□□□□□ -1.34
SOX1O00570 AC087575.1-201ENST00000585087 229 ntBASIC6.65□□□□□ -1.34
SOX1O00570 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.65□□□□□ -1.34
SOX1O00570 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.65□□□□□ -1.34
SOX1O00570 CU639417.4-201ENST00000623928 207 ntBASIC6.65□□□□□ -1.34
SOX1O00570 MIR6863-201ENST00000636112 90 ntBASIC6.65□□□□□ -1.34
SOX1O00570 AC024614.3-201ENST00000637860 256 ntBASIC6.65□□□□□ -1.34
SOX1O00570 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX1O00570 AL137918.1-201ENST00000624542 1922 ntBASIC6.65□□□□□ -1.34
SOX1O00570 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.65□□□□□ -1.34
SOX1O00570 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SOX1O00570 ZNF840P-201ENST00000504759 1996 ntBASIC6.65□□□□□ -1.34
SOX1O00570 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
SOX1O00570 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
SOX1O00570 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
SOX1O00570 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.35
SOX1O00570 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.65□□□□□ -1.35
SOX1O00570 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SOX1O00570 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
SOX1O00570 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.65□□□□□ -1.35
SOX1O00570 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SOX1O00570 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SOX1O00570 AC012078.1-201ENST00000405035 1646 ntBASIC6.65□□□□□ -1.35
SOX1O00570 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.65□□□□□ -1.35
SOX1O00570 AL359091.1-201ENST00000449048 1734 ntBASIC6.64□□□□□ -1.35
SOX1O00570 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX1O00570 AC025470.1-201ENST00000510053 2032 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
SOX1O00570 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SOX1O00570 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 AC112255.1-201ENST00000624070 2493 ntBASIC6.64□□□□□ -1.35
SOX1O00570 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SOX1O00570 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SOX1O00570 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.64□□□□□ -1.35
SOX1O00570 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.64□□□□□ -1.35
SOX1O00570 Y_RNA.509-201ENST00000384506 99 ntBASIC6.64□□□□□ -1.35
SOX1O00570 AL161909.1-201ENST00000397390 712 ntBASIC6.64□□□□□ -1.35
SOX1O00570 RN7SKP213-201ENST00000410746 298 ntBASIC6.64□□□□□ -1.35
SOX1O00570 RPS20P15-201ENST00000412792 311 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms