Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
O00370 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.09□□□□□ -1.59
O00370 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.09□□□□□ -1.59
O00370 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.09□□□□□ -1.59
O00370 MIR421-201ENST00000365696 85 ntBASIC5.09□□□□□ -1.59
O00370 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
O00370 SNORA68.2-201ENST00000391263 128 ntBASIC5.09□□□□□ -1.59
O00370 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.09□□□□□ -1.59
O00370 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
O00370 VN1R37P-201ENST00000419096 748 ntBASIC5.09□□□□□ -1.59
O00370 EIF4HP2-201ENST00000424380 563 ntBASIC5.09□□□□□ -1.59
O00370 AL445528.1-201ENST00000426330 420 ntBASIC5.09□□□□□ -1.59
O00370 NMNAT1P2-201ENST00000435192 860 ntBASIC5.09□□□□□ -1.59
O00370 AC093716.1-201ENST00000435923 377 ntBASIC5.09□□□□□ -1.59
O00370 ARL4AP3-201ENST00000441452 574 ntBASIC5.09□□□□□ -1.59
O00370 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.09□□□□□ -1.59
O00370 BUD31P2-201ENST00000449374 300 ntBASIC5.09□□□□□ -1.59
O00370 AC104629.2-201ENST00000468627 598 ntBASIC5.09□□□□□ -1.59
O00370 AC090543.1-201ENST00000492168 485 ntBASIC5.09□□□□□ -1.59
O00370 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.09□□□□□ -1.59
O00370 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.09□□□□□ -1.59
O00370 SCARNA22-201ENST00000503991 125 ntBASIC5.09□□□□□ -1.59
O00370 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.09□□□□□ -1.59
O00370 HMGB1P47-201ENST00000511281 589 ntBASIC5.09□□□□□ -1.59
O00370 RNA5SP228-201ENST00000516232 133 ntBASIC5.09□□□□□ -1.59
O00370 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.09□□□□□ -1.59
O00370 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.09□□□□□ -1.59
O00370 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.09□□□□□ -1.59
O00370 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.09□□□□□ -1.59
O00370 PCNPP1-201ENST00000552501 511 ntBASIC5.09□□□□□ -1.59
O00370 AC087477.6-201ENST00000559595 843 ntBASIC5.09□□□□□ -1.59
O00370 MIR4737-201ENST00000583979 81 ntBASIC5.09□□□□□ -1.59
O00370 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.09□□□□□ -1.59
O00370 AC024940.4-201ENST00000605507 246 ntBASIC5.09□□□□□ -1.59
O00370 FAM25E-202ENST00000608562 189 ntBASIC5.09□□□□□ -1.59
O00370 FAM27B-201ENST00000610601 213 ntBASIC5.09□□□□□ -1.59
O00370 AC074276.2-201ENST00000619891 348 ntBASIC5.09□□□□□ -1.59
O00370 AC073592.7-201ENST00000623659 507 ntBASIC5.09□□□□□ -1.59
O00370 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.09□□□□□ -1.59
O00370 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
O00370 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
O00370 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
O00370 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.6
O00370 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
O00370 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.09□□□□□ -1.6
O00370 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
O00370 AC053481.2-202ENST00000582394 1500 ntBASIC5.08□□□□□ -1.6
O00370 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.08□□□□□ -1.6
O00370 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.08□□□□□ -1.6
O00370 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
O00370 BTBD10P1-201ENST00000549824 1352 ntBASIC5.08□□□□□ -1.6
O00370 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
O00370 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
O00370 RNU4-44P-201ENST00000363050 141 ntBASIC5.08□□□□□ -1.6
O00370 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.08□□□□□ -1.6
O00370 BMS1P3-201ENST00000372011 932 ntBASIC5.08□□□□□ -1.6
O00370 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.08□□□□□ -1.6
O00370 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.08□□□□□ -1.6
O00370 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
O00370 ARL4AP5-201ENST00000404372 599 ntBASIC5.08□□□□□ -1.6
O00370 RN7SKP100-201ENST00000411258 284 ntBASIC5.08□□□□□ -1.6
O00370 AC009302.1-201ENST00000417147 390 ntBASIC5.08□□□□□ -1.6
O00370 MTCO1P45-201ENST00000431457 267 ntBASIC5.08□□□□□ -1.6
O00370 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.08□□□□□ -1.6
O00370 AC099063.2-201ENST00000446360 662 ntBASIC5.08□□□□□ -1.6
O00370 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.08□□□□□ -1.6
O00370 AP002345.1-201ENST00000456493 928 ntBASIC5.08□□□□□ -1.6
O00370 RPS5P7-201ENST00000456664 608 ntBASIC5.08□□□□□ -1.6
O00370 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.08□□□□□ -1.6
O00370 AC021205.1-201ENST00000468797 348 ntBASIC5.08□□□□□ -1.6
O00370 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.08□□□□□ -1.6
O00370 AC104971.1-201ENST00000495117 578 ntBASIC5.08□□□□□ -1.6
O00370 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.08□□□□□ -1.6
O00370 AP001880.2-201ENST00000538233 448 ntBASIC5.08□□□□□ -1.6
O00370 AC133555.2-201ENST00000550213 292 ntBASIC5.08□□□□□ -1.6
O00370 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.08□□□□□ -1.6
O00370 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.08□□□□□ -1.6
O00370 MIR3667-201ENST00000581025 74 ntBASIC5.08□□□□□ -1.6
O00370 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.08□□□□□ -1.6
O00370 IMMP1LP1-201ENST00000605170 488 ntBASIC5.08□□□□□ -1.6
O00370 AC015802.5-201ENST00000607478 399 ntBASIC5.08□□□□□ -1.6
O00370 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.08□□□□□ -1.6
O00370 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
O00370 AC015804.1-201ENST00000622935 435 ntBASIC5.08□□□□□ -1.6
O00370 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
O00370 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
O00370 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
O00370 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
O00370 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.08□□□□□ -1.6
O00370 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.08□□□□□ -1.6
O00370 AC110792.3-201ENST00000595906 1614 ntBASIC5.08□□□□□ -1.6
O00370 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
O00370 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
O00370 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
O00370 CASC19-206ENST00000641028 1430 ntBASIC5.07□□□□□ -1.6
O00370 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
O00370 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
O00370 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
O00370 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
O00370 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms