Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 CCT8P1-201ENST00000413611 1657 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC021242.1-201ENST00000507315 2035 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 RNU6-792P-201ENST00000363490 107 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 SNORA2.3-201ENST00000383920 135 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 RNU6-452P-201ENST00000384406 107 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 RNFT1P2-201ENST00000443064 757 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 CYCSP24-201ENST00000445119 316 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 RPL34P26-201ENST00000445636 354 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 RPL7AP52-201ENST00000458096 790 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 RN7SL205P-201ENST00000490174 284 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 MYL12BP2-201ENST00000503948 512 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 RNA5SP43-201ENST00000516559 110 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 OR8A2P-201ENST00000528631 952 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 HIGD1AP5-201ENST00000529959 259 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC084759.1-201ENST00000561168 290 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC009117.1-201ENST00000563948 554 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC127024.5-201ENST00000580085 462 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC098483.2-201ENST00000603158 454 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC090525.3-201ENST00000605601 189 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AP001033.2-201ENST00000609701 1003 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 MIR6798-201ENST00000612887 67 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 BNIP3P41-202ENST00000616656 861 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 AC002525.1-201ENST00000624392 1622 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 MAPK10-263ENST00000641052 4307 ntBASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NPIPA3F8WFD2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 RNU6-252P-201ENST00000363232 107 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 MIR142-201ENST00000384835 87 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 HMGB1P10-201ENST00000395823 563 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 COX5BP7-201ENST00000414780 274 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 OR13Z1P-201ENST00000416141 834 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 FO393419.3-201ENST00000428741 282 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 USP9YP9-201ENST00000429406 715 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 MTCO1P52-201ENST00000433928 531 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 FHP1-201ENST00000442741 703 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 AL354714.3-201ENST00000447284 493 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 AC243772.1-201ENST00000451620 410 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 HMGB1P26-201ENST00000452520 628 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 AC078857.1-201ENST00000469870 667 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 RPS29P22-201ENST00000472363 168 ntBASIC4.55□□□□□ -1.68
NPIPA3F8WFD2 NIFKP7-201ENST00000503365 834 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms