Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AC010300.1-201ENST00000600671 5134 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 RNU6-386P-201ENST00000362650 107 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 RNU6-697P-201ENST00000363348 107 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AC114755.2-201ENST00000413520 361 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 RPEP3-201ENST00000425462 676 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 MAPRE1P3-201ENST00000435438 796 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 RPL7L1P1-201ENST00000448259 785 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 RN7SL814P-201ENST00000487715 300 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AC025674.1-201ENST00000507074 324 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 BTG4P1-201ENST00000510421 183 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AC084759.1-201ENST00000561168 290 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AC093227.2-201ENST00000589357 285 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AC022387.2-201ENST00000604050 448 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AP000648.2-201ENST00000624182 404 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 NAMPTP1-201ENST00000440465 2514 ntBASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.66□□□□□ -1.66
TRABD2BA6NFA1 AL592148.3-201ENST00000608771 2646 ntBASIC4.65□□□□□ -1.66
TRABD2BA6NFA1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.65□□□□□ -1.66
TRABD2BA6NFA1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
TRABD2BA6NFA1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AL359837.1-201ENST00000381357 287 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 MIR1271-201ENST00000408537 86 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 MTATP6P19-201ENST00000413797 659 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 SETP10-201ENST00000424368 814 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AL392003.1-201ENST00000434394 243 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 RSL24D1P8-201ENST00000434442 492 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 RPL7P32-201ENST00000457119 744 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 RPL7AP10-201ENST00000481016 791 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AC116562.1-201ENST00000485355 781 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 MTCO1P35-201ENST00000515270 228 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AC106785.1-201ENST00000565935 262 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 RN7SL435P-201ENST00000584418 282 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AL353600.1-201ENST00000608148 251 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 OR51H2P-202ENST00000641424 3046 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 DDX18P6-201ENST00000450119 1997 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 AC005332.5-201ENST00000591222 2919 ntBASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRABD2BA6NFA1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 RNU6-819P-201ENST00000364116 107 ntBASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 ATP5HP3-201ENST00000396994 486 ntBASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 CYP4F29P-201ENST00000420685 446 ntBASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 AL034379.1-201ENST00000423216 253 ntBASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 FABP7P1-201ENST00000424004 391 ntBASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 OR2AH1P-201ENST00000425717 928 ntBASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 CBX1P1-201ENST00000440184 427 ntBASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 TDGF1P1-201ENST00000445734 527 ntBASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 AL359073.1-201ENST00000448036 403 ntBASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 AC034236.1-201ENST00000469891 373 ntBASIC4.64□□□□□ -1.67
TRABD2BA6NFA1 NIP7P2-201ENST00000485801 544 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms