Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 HCFC2P1-201ENST00000392864 1592 ntBASIC5.62□□□□□ -1.51
CTNNA3Q9UI47 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.62□□□□□ -1.51
CTNNA3Q9UI47 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.62□□□□□ -1.51
CTNNA3Q9UI47 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTNNA3Q9UI47 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 BMS1P3-201ENST00000372011 932 ntBASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 AL031119.1-201ENST00000404707 1879 ntBASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 AL080315.1-201ENST00000406055 466 ntBASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 AL110118.1-201ENST00000553543 400 ntBASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 AC011270.1-201ENST00000558606 583 ntBASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 AC019193.2-201ENST00000610012 634 ntBASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CTNNA3Q9UI47 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 DDX18P4-201ENST00000511690 1966 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 MAPK10-286ENST00000641208 8747 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AC079741.1-201ENST00000321498 212 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 RNU6-167P-201ENST00000384292 106 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 OR51B3P-201ENST00000412287 913 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AC019050.1-201ENST00000418508 492 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AC140479.3-201ENST00000418944 1126 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 FABP7P1-201ENST00000424004 391 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AC097523.2-201ENST00000435551 652 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 RPS26P2-201ENST00000440331 348 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 EIF2S2P5-201ENST00000457635 968 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 RNU2-30P-201ENST00000516209 141 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AP006289.1-201ENST00000538089 277 ntBASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA3Q9UI47 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 RNU1-83P-201ENST00000363426 164 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 MIR298-201ENST00000401212 88 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 Z98745.1-201ENST00000402553 494 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AC092570.3-201ENST00000420113 693 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AC009480.2-201ENST00000422916 432 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AL450263.2-201ENST00000439400 589 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AC073264.2-201ENST00000448886 166 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 RPS23P7-201ENST00000466210 444 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 RN7SL354P-201ENST00000469282 294 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 OR7H2P-201ENST00000513483 306 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AC134698.5-201ENST00000519444 336 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 SS18L2P2-201ENST00000583960 235 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AC098935.2-201ENST00000604222 466 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 AC009704.2-201ENST00000618739 483 ntBASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA3Q9UI47 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms