Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 OR51K1P-201ENST00000510214 950 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 RAB9BP1-201ENST00000519581 626 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AP003499.2-201ENST00000624100 483 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AC006453.5-201ENST00000636451 619 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 DHX40P1-201ENST00000588725 1412 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 LINC01355-201ENST00000566551 5444 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 NEAT1-202ENST00000501122 22743 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 DDX18P5-201ENST00000534547 1306 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 SNORD113.2-201ENST00000364166 89 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 RPS3AP23-201ENST00000401762 784 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 AC013470.3-201ENST00000420252 1194 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 AL358176.3-201ENST00000420757 454 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 AC006065.1-201ENST00000422539 802 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 RGS17P1-201ENST00000423358 553 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 CENPIP1-201ENST00000425713 902 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 snoU13.1-201ENST00000459157 104 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 OR52A4P-201ENST00000472867 958 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 AC022795.1-201ENST00000473808 480 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 RN7SL481P-201ENST00000477764 299 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 ARL4AP1-201ENST00000503220 705 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 SNORD116-30-201ENST00000516468 85 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 FKBP1BP1-201ENST00000553366 325 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 AC096553.1-201ENST00000605169 829 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 AL008729.2-201ENST00000606393 473 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 AP001273.1-201ENST00000624493 3152 ntBASIC5.53□□□□□ -1.52
CLIP2Q9UDT6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 AC000123.3-201ENST00000624029 4975 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 VN1R31P-201ENST00000417498 730 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 RAB9AP5-201ENST00000437794 597 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 RAB9AP2-201ENST00000443911 597 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 ARL2BPP10-201ENST00000446487 531 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 H2AFZP5-201ENST00000446960 382 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 MTCYBP14-201ENST00000457471 715 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 SEPT14P1-201ENST00000458703 648 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 AK3P4-201ENST00000504283 583 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 AL121839.1-201ENST00000556233 1185 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 AF230666.2-201ENST00000602328 725 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 AL596275.2-204ENST00000641628 552 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 AL596275.2-206ENST00000641957 626 ntBASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLIP2Q9UDT6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLIP2Q9UDT6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLIP2Q9UDT6 AC104118.1-201ENST00000607625 1589 ntBASIC5.51□□□□□ -1.53
CLIP2Q9UDT6 DHX9P1-201ENST00000436565 3076 ntBASIC5.51□□□□□ -1.53
CLIP2Q9UDT6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.51□□□□□ -1.53
CLIP2Q9UDT6 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.51□□□□□ -1.53
CLIP2Q9UDT6 AL590762.2-201ENST00000395798 571 ntBASIC5.51□□□□□ -1.53
CLIP2Q9UDT6 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms