Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 RNU6-1263P-201ENST00000384601 106 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 RPS27AP7-201ENST00000422792 455 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 RPL7P57-201ENST00000423238 740 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 RPL23AP1-201ENST00000428990 471 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AC068287.1-201ENST00000430283 295 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 ARL2BPP10-201ENST00000446487 531 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 snoU13.1-201ENST00000459157 104 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AC090142.1-201ENST00000465776 462 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 MTND4LP2-201ENST00000502312 285 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 SNORA70.17-201ENST00000516449 133 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 ELOCP28-201ENST00000590044 317 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AL592494.3-201ENST00000609485 464 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 MIR378J-201ENST00000611988 109 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 MIR6798-201ENST00000612887 67 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 U3.53-201ENST00000628922 216 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AL356317.1-201ENST00000396110 1436 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AC000374.1-201ENST00000434698 1745 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 AC107021.2-201ENST00000567714 2095 ntBASIC4.17□□□□□ -1.74
CLCF1Q9UBD9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AC008549.2-201ENST00000333482 706 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 RNU6-729P-201ENST00000384399 107 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AP000580.1-201ENST00000404439 358 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AL139039.2-201ENST00000407436 479 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 E2F6P2-201ENST00000420708 748 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 NPM1P33-201ENST00000438918 872 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 XKRYP6-201ENST00000440468 1116 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 XKRYP3-201ENST00000442113 1116 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 TXNP2-201ENST00000443918 295 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AL162591.2-201ENST00000449634 317 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 RN7SL481P-201ENST00000477764 299 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 NPM1P29-201ENST00000483112 803 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 HMGB3P14-201ENST00000494195 599 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AK4P6-201ENST00000505168 528 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 MTND2P13-201ENST00000577438 1039 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AP005119.2-201ENST00000579735 1105 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 MIR4715-201ENST00000584117 79 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AL023583.1-201ENST00000607518 1143 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 OR56B2P-202ENST00000641377 2453 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 MAPK10-349ENST00000641767 3661 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 TTC39DP-201ENST00000416781 1688 ntBASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCF1Q9UBD9 AL031119.1-201ENST00000404707 1879 ntBASIC4.15□□□□□ -1.74
CLCF1Q9UBD9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLCF1Q9UBD9 AL731566.1-201ENST00000620490 1937 ntBASIC4.15□□□□□ -1.74
CLCF1Q9UBD9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLCF1Q9UBD9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
CLCF1Q9UBD9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CLCF1Q9UBD9 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.15□□□□□ -1.74
CLCF1Q9UBD9 AC087565.3-202ENST00000642085 1603 ntBASIC4.15□□□□□ -1.74
CLCF1Q9UBD9 RNU6-670P-201ENST00000364312 104 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 RNU6-1320P-201ENST00000390838 107 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 RNU6-1269P-201ENST00000391139 107 ntBASIC4.15□□□□□ -1.75
CLCF1Q9UBD9 Z98745.1-201ENST00000402553 494 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms