Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.3□□□□□ -1.72
CCDC88CQ9P219 RPL23AP59-201ENST00000399415 461 ntBASIC4.3□□□□□ -1.72
CCDC88CQ9P219 SNORA11F-201ENST00000408237 128 ntBASIC4.3□□□□□ -1.72
CCDC88CQ9P219 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 RPL23AP24-201ENST00000458203 385 ntBASIC4.3□□□□□ -1.72
CCDC88CQ9P219 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.3□□□□□ -1.72
CCDC88CQ9P219 AC021146.3-201ENST00000511911 260 ntBASIC4.3□□□□□ -1.72
CCDC88CQ9P219 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 AL031119.1-201ENST00000404707 1879 ntBASIC4.3□□□□□ -1.72
CCDC88CQ9P219 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 AP001273.1-201ENST00000624493 3152 ntBASIC4.3□□□□□ -1.72
CCDC88CQ9P219 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC011933.1-201ENST00000413334 321 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 TMSB10P2-201ENST00000416049 131 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AL592293.2-201ENST00000422292 996 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AL606490.8-201ENST00000441624 319 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC116533.1-201ENST00000459748 321 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC090948.1-201ENST00000607464 549 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC063923.1-201ENST00000478982 1619 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AL356317.1-201ENST00000396110 1436 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 OR56B2P-202ENST00000641377 2453 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC021242.1-201ENST00000507315 2035 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 CEACAMP8-201ENST00000413902 580 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AL356387.2-201ENST00000422272 243 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 RPL12P34-201ENST00000424532 479 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC012519.1-201ENST00000424588 610 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 FTH1P16-201ENST00000435241 552 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AC020898.1-201ENST00000474167 787 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 RPL36AP41-201ENST00000493820 306 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.29□□□□□ -1.72
CCDC88CQ9P219 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC88CQ9P219 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 AC025031.4-201ENST00000621248 3271 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 RNA5SP151-201ENST00000365632 117 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 OR13Z1P-201ENST00000416141 834 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 RPL7AP25-201ENST00000423357 805 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 RPS27AP15-201ENST00000447672 466 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 ISCUP1-201ENST00000454451 448 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 AC108475.1-201ENST00000507880 950 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 AC111000.3-201ENST00000508057 576 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 RN7SL176P-201ENST00000580352 264 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 AC233702.9-201ENST00000581528 203 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 AL122125.1-201ENST00000616999 600 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 AL121890.3-201ENST00000618494 516 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC88CQ9P219 AC108751.5-201ENST00000492880 1336 ntBASIC4.28□□□□□ -1.72
CCDC88CQ9P219 RNA5SP307-201ENST00000362863 116 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 MIR298-201ENST00000401212 88 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 AL732292.1-201ENST00000426692 226 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 TBCAP1-201ENST00000436520 327 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 AC009220.1-201ENST00000451614 275 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 RPL7AP52-201ENST00000458096 790 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 AL161747.1-201ENST00000480068 358 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.28□□□□□ -1.73
CCDC88CQ9P219 AC091178.1-203ENST00000584586 279 ntBASIC4.28□□□□□ -1.73
CCDC88CQ9P219 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.28□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms