Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RPS15AP30-201ENST00000420976 390 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AL591503.2-201ENST00000442314 1005 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 GTF3AP5-201ENST00000442645 697 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AL606662.1-201ENST00000445763 553 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RPL31P15-201ENST00000449770 338 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AL603882.1-201ENST00000463059 681 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 ZNF542P-204ENST00000482727 1305 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 OR4D12P-201ENST00000509361 911 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC008885.2-201ENST00000509506 930 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RNU6-759P-201ENST00000516740 103 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RN7SKP35-201ENST00000517210 151 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 MTCO1P49-201ENST00000523429 802 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 OR4A43P-201ENST00000532938 908 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC008055.1-201ENST00000547032 609 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC079905.1-201ENST00000549280 475 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC008507.3-201ENST00000585753 472 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AL513327.3-201ENST00000602618 469 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC097505.1-201ENST00000610199 565 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 AC091931.1-201ENST00000623488 728 ntBASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
CCM2LQ9NUG4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 AC092079.1-201ENST00000558620 1985 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 EIF3EP1-201ENST00000433978 1316 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 AL512646.1-201ENST00000269395 1077 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 Y_RNA.311-201ENST00000365068 96 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 PEX12P1-201ENST00000400284 1048 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 RNU6-272P-201ENST00000411028 104 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 GSTM3P2-201ENST00000412746 530 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 RPL21P50-201ENST00000417698 477 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 ZNF885P-201ENST00000420174 1098 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 AL022400.1-201ENST00000423946 935 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 AL050321.1-201ENST00000432363 400 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 MTCO3P5-201ENST00000433620 714 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 RPL5P25-201ENST00000441148 775 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 MTCO2P7-201ENST00000446518 666 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 RPS27AP15-201ENST00000447672 466 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 TPTE2P5-203ENST00000458118 728 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 NXT1P1-201ENST00000458481 316 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 RPL30P6-201ENST00000475925 342 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 ACTG1P13-201ENST00000486987 1043 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 LSM3P4-201ENST00000502948 309 ntBASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.6□□□□□ -1.51
CCM2LQ9NUG4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms