Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 XKRY2-202ENST00000623874 1581 ntBASIC4.38□□□□□ -1.71
LRTM1Q9HBL6 XKRY-202ENST00000624960 1581 ntBASIC4.38□□□□□ -1.71
LRTM1Q9HBL6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
LRTM1Q9HBL6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.38□□□□□ -1.71
LRTM1Q9HBL6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LRTM1Q9HBL6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRTM1Q9HBL6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRTM1Q9HBL6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 ZNF137P-201ENST00000456718 1920 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 RNU1-63P-201ENST00000383902 164 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 ATG4AP1-201ENST00000416893 538 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 RPS27AP15-201ENST00000447672 466 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 MTND6P5-201ENST00000448266 512 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 NDUFA12P1-201ENST00000455914 406 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AC007016.1-201ENST00000512110 244 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 MIR4737-201ENST00000583979 81 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AC234771.5-201ENST00000600161 514 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AC124856.1-201ENST00000600819 896 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AL031320.1-201ENST00000604177 357 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AP002360.3-201ENST00000607673 710 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AL121890.2-201ENST00000617644 465 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AC016717.3-201ENST00000624730 554 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 AL513548.1-201ENST00000562904 1724 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 NAMPTP1-201ENST00000440465 2514 ntBASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.37□□□□□ -1.71
LRTM1Q9HBL6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 NXPH1-205ENST00000602349 1953 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 SNORA71.2-201ENST00000364941 134 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 RNU1-44P-201ENST00000384453 163 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 GAPDHP15-201ENST00000398586 975 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 SSR1P1-201ENST00000407630 814 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 RN7SKP167-201ENST00000411047 285 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 RN7SKP247-201ENST00000411094 308 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC062016.2-201ENST00000420950 676 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AL450263.2-201ENST00000439400 589 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC091153.1-201ENST00000466297 402 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 RN7SL459P-201ENST00000481078 302 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 STMN1P2-201ENST00000508435 439 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC100770.1-201ENST00000532310 322 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AL161616.1-201ENST00000611867 286 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC093775.1-201ENST00000624154 1868 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 AC139769.1-204ENST00000472297 1931 ntBASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRTM1Q9HBL6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 RNU1-32P-201ENST00000363937 159 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 MIR137-201ENST00000385223 102 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms