Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC133552.1-201ENST00000569988 4007 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RNU4-40P-201ENST00000364351 143 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RNA5SP487-201ENST00000410186 122 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RN7SKP125-201ENST00000410481 302 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RN7SKP273-201ENST00000411392 314 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 KRR1P1-201ENST00000419430 803 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC090018.1-201ENST00000434369 367 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 VN1R25P-201ENST00000443385 738 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC012512.1-201ENST00000446594 718 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC096992.1-201ENST00000459808 709 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RPS20P4-201ENST00000461659 355 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RN7SL222P-201ENST00000476452 299 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RN7SL826P-201ENST00000479724 288 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC004453.1-201ENST00000487895 408 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RPS27AP16-201ENST00000492222 470 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 MTND4LP2-201ENST00000502312 285 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 SNORA31.13-201ENST00000516624 135 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC100784.1-201ENST00000522790 310 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 OR4U1P-201ENST00000554958 912 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC127381.1-201ENST00000555979 939 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 MIR4789-201ENST00000577469 82 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC245036.5-201ENST00000596330 847 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 VN1R87P-201ENST00000596706 487 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC008751.2-201ENST00000597885 980 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 NIFKP6-201ENST00000598115 845 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC008814.1-201ENST00000603797 406 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC002487.1-201ENST00000604565 994 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC009597.2-201ENST00000604659 592 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC126915.2-201ENST00000610957 190 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC004777.1-201ENST00000624317 287 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 MTCO1P7-201ENST00000419523 1542 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 AC017007.4-201ENST00000503353 1352 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 TRIM51GP-201ENST00000534741 1350 ntBASIC5.41□□□□□ -1.54
USP29Q9HBJ7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 RNU4-28P-201ENST00000364739 141 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 RNU4-7P-201ENST00000364758 141 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 MIR765-201ENST00000390226 114 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 RNU1-77P-201ENST00000390868 162 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 RN7SKP97-201ENST00000410966 333 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 NPM1P40-201ENST00000412758 733 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 LIPT1P1-201ENST00000415870 1186 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AL449283.1-202ENST00000418249 604 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC005033.1-201ENST00000428904 813 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 SETP8-201ENST00000435341 628 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 FAR2P1-206ENST00000449736 709 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 RBMY2TP-201ENST00000451162 947 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC021660.1-201ENST00000465006 554 ntBASIC5.4□□□□□ -1.54
USP29Q9HBJ7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms