Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC007529.1-201ENST00000418574 2178 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC114546.3-201ENST00000623582 1734 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 STAG3L4-201ENST00000352103 530 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 RNA5SP333-201ENST00000363466 118 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 RNA5SP334-201ENST00000364825 118 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 Y_RNA.517-201ENST00000384551 106 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 MIR188-201ENST00000385034 86 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 YWHAZP6-201ENST00000399764 738 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 HMGB1P17-201ENST00000403495 628 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AL139805.1-201ENST00000407837 289 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 NUP35P2-201ENST00000416748 943 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 RPL7P30-201ENST00000420888 709 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 MTCO3P30-201ENST00000426425 670 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 snoU13.7-201ENST00000459220 104 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 PPP1R11P1-201ENST00000486095 376 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC113430.1-201ENST00000506872 718 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 POU5F1P7-201ENST00000508759 541 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC109458.1-201ENST00000508858 316 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC093809.1-201ENST00000509155 340 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC104057.1-201ENST00000515547 497 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC084121.1-201ENST00000533882 835 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 TOMM20P1-201ENST00000534518 427 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 MIR4301-201ENST00000577203 66 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AP001094.1-201ENST00000579805 193 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 ZNF415P1-201ENST00000582279 1166 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC087683.1-201ENST00000591187 441 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AL589863.1-201ENST00000595383 631 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC103710.4-201ENST00000609301 899 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AL135999.3-201ENST00000610501 812 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC073592.6-201ENST00000624271 415 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 LINC02495-203ENST00000636704 242 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 MIR1910-201ENST00000636955 80 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 AC006210.2-201ENST00000367074 1545 ntBASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
TRAIPQ9BWF2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 AP002907.1-201ENST00000606361 1430 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 AC022905.1-201ENST00000503430 3048 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 AC103591.2-201ENST00000265259 766 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 RN7SKP186-201ENST00000365371 303 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 SNORA51.6-201ENST00000384151 125 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 RNU6-1119P-201ENST00000384349 108 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 MTCYBP36-201ENST00000404146 440 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 MTCO1P21-201ENST00000416634 589 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 FNDC3CP-201ENST00000420795 1155 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 CYCSP52-201ENST00000422857 310 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 MTND1P27-201ENST00000451117 902 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 AP000797.1-201ENST00000478870 387 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.1□□□□□ -1.27
TRAIPQ9BWF2 AC083906.1-201ENST00000509298 406 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms