Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
IFT140Q96RY7 AL445487.1-201ENST00000415694 1580 ntBASIC7.28□□□□□ -1.24
IFT140Q96RY7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
IFT140Q96RY7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
IFT140Q96RY7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC7.28□□□□□ -1.24
IFT140Q96RY7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
IFT140Q96RY7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
IFT140Q96RY7 RNU11-4P-201ENST00000391149 133 ntBASIC7.28□□□□□ -1.24
IFT140Q96RY7 RAB9AP3-201ENST00000412737 573 ntBASIC7.28□□□□□ -1.24
IFT140Q96RY7 TPT1P2-201ENST00000413105 503 ntBASIC7.28□□□□□ -1.24
IFT140Q96RY7 PDSS1P1-201ENST00000422953 1114 ntBASIC7.28□□□□□ -1.24
IFT140Q96RY7 RPL21P43-201ENST00000425440 472 ntBASIC7.28□□□□□ -1.24
IFT140Q96RY7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC7.28□□□□□ -1.24
IFT140Q96RY7 AL512326.1-201ENST00000443050 721 ntBASIC7.28□□□□□ -1.24
IFT140Q96RY7 RAB9AP1-201ENST00000449393 573 ntBASIC7.28□□□□□ -1.24
IFT140Q96RY7 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.28□□□□□ -1.24
IFT140Q96RY7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC7.28□□□□□ -1.24
IFT140Q96RY7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC7.28□□□□□ -1.24
IFT140Q96RY7 PAICSP4-201ENST00000517543 1253 ntBASIC7.28□□□□□ -1.24
IFT140Q96RY7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC7.28□□□□□ -1.24
IFT140Q96RY7 AC096553.1-201ENST00000605169 829 ntBASIC7.28□□□□□ -1.24
IFT140Q96RY7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
IFT140Q96RY7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC7.28□□□□□ -1.24
IFT140Q96RY7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.28□□□□□ -1.24
IFT140Q96RY7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
IFT140Q96RY7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 RNA5SP36-201ENST00000410197 133 ntBASIC7.27□□□□□ -1.25
IFT140Q96RY7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 Z95327.3-201ENST00000610385 572 ntBASIC7.27□□□□□ -1.25
IFT140Q96RY7 AC007342.8-201ENST00000623278 678 ntBASIC7.27□□□□□ -1.25
IFT140Q96RY7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
IFT140Q96RY7 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
IFT140Q96RY7 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
IFT140Q96RY7 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 Z82217.1-201ENST00000625157 8149 ntBASIC7.26□□□□□ -1.25
IFT140Q96RY7 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 PTMAP5-201ENST00000393073 333 ntBASIC7.26□□□□□ -1.25
IFT140Q96RY7 RPS21P8-201ENST00000413365 247 ntBASIC7.26□□□□□ -1.25
IFT140Q96RY7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 RPL35AP21-201ENST00000437667 333 ntBASIC7.26□□□□□ -1.25
IFT140Q96RY7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
IFT140Q96RY7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
IFT140Q96RY7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
IFT140Q96RY7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.26□□□□□ -1.25
IFT140Q96RY7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
IFT140Q96RY7 AC006042.3-201ENST00000454684 1469 ntBASIC7.26□□□□□ -1.25
IFT140Q96RY7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC7.25□□□□□ -1.25
IFT140Q96RY7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC7.25□□□□□ -1.25
IFT140Q96RY7 AC139769.1-204ENST00000472297 1931 ntBASIC7.25□□□□□ -1.25
IFT140Q96RY7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
IFT140Q96RY7 RN7SKP182-201ENST00000410772 298 ntBASIC7.25□□□□□ -1.25
IFT140Q96RY7 ARAFP1-201ENST00000422172 605 ntBASIC7.25□□□□□ -1.25
IFT140Q96RY7 PPIAP13-201ENST00000434706 478 ntBASIC7.25□□□□□ -1.25
IFT140Q96RY7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC7.25□□□□□ -1.25
IFT140Q96RY7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC7.25□□□□□ -1.25
IFT140Q96RY7 RN7SL812P-201ENST00000493791 279 ntBASIC7.25□□□□□ -1.25
IFT140Q96RY7 ACTR3BP4-201ENST00000503033 1244 ntBASIC7.25□□□□□ -1.25
IFT140Q96RY7 KCTD9P2-201ENST00000512203 1013 ntBASIC7.25□□□□□ -1.25
IFT140Q96RY7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.25□□□□□ -1.25
IFT140Q96RY7 AC006349.1-201ENST00000555526 235 ntBASIC7.25□□□□□ -1.25
IFT140Q96RY7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC7.25□□□□□ -1.25
IFT140Q96RY7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
IFT140Q96RY7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
IFT140Q96RY7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
IFT140Q96RY7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
IFT140Q96RY7 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
IFT140Q96RY7 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
IFT140Q96RY7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 AC091286.1-201ENST00000431233 461 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 AC006499.5-201ENST00000505037 514 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 AC019176.2-201ENST00000611579 315 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 MIR6500-201ENST00000622700 86 ntBASIC7.24□□□□□ -1.25
IFT140Q96RY7 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
IFT140Q96RY7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms