Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL21A1Q96P44 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 ZFRP1-201ENST00000457579 2970 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC091046.3-201ENST00000631455 1574 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL21A1Q96P44 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AL442639.1-201ENST00000625030 1899 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC027228.2-201ENST00000567141 2154 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 RNA5SP87-201ENST00000384155 118 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 AL590762.2-201ENST00000395798 571 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC233289.1-201ENST00000403700 508 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 AL139128.1-201ENST00000413921 941 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 RAB9AP4-201ENST00000415230 609 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 BX510359.2-201ENST00000417920 305 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 GTF2IP2-201ENST00000424290 697 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 AL360081.1-201ENST00000428299 555 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 FTH1P2-201ENST00000466086 412 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 AGGF1P3-201ENST00000493675 1213 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 SCARNA22-201ENST00000503991 125 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC091868.1-201ENST00000508746 304 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 MIR4480-201ENST00000582492 71 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 OR7A19P-201ENST00000608051 733 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 AL159169.2-201ENST00000610061 1269 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 Mico1.1-201ENST00000611698 204 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC006840.1-201ENST00000623069 542 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC091953.3-201ENST00000623220 236 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.38□□□□□ -1.71
COL21A1Q96P44 AC093775.1-201ENST00000624154 1868 ntBASIC4.38□□□□□ -1.71
COL21A1Q96P44 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COL21A1Q96P44 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL21A1Q96P44 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL21A1Q96P44 HSPD1P14-201ENST00000432666 1618 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL21A1Q96P44 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL21A1Q96P44 RNU1-108P-201ENST00000362556 161 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 RNU6-1320P-201ENST00000390838 107 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 RNU6-1269P-201ENST00000391139 107 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL21A1Q96P44 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL21A1Q96P44 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 GLUD1P9-201ENST00000420997 1173 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 BTG3P1-201ENST00000435859 716 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 AC005154.2-201ENST00000438110 379 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 AC016831.4-201ENST00000438302 307 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 RNU6-599P-201ENST00000459383 107 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 RNU6-1193P-201ENST00000459461 107 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 AL133372.1-201ENST00000493565 745 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 AC105233.1-201ENST00000498840 781 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL21A1Q96P44 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 AC015912.2-201ENST00000571053 181 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 AC073137.1-201ENST00000605636 634 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 RNU6-368P-201ENST00000620928 107 ntBASIC4.37□□□□□ -1.71
COL21A1Q96P44 RNU6-538P-201ENST00000622329 107 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms