Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 MTND2P4-201ENST00000445034 1004 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC6.19□□□□□ -1.42
ERCC4Q92889 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.19□□□□□ -1.42
ERCC4Q92889 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.19□□□□□ -1.42
ERCC4Q92889 NENFP3-201ENST00000503735 313 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.19□□□□□ -1.42
ERCC4Q92889 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC060775.1-201ENST00000518241 520 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.19□□□□□ -1.42
ERCC4Q92889 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC016180.1-201ENST00000567945 403 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC022662.1-201ENST00000580252 331 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 FAM106CP-201ENST00000582212 507 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.19□□□□□ -1.42
ERCC4Q92889 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ERCC4Q92889 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC013562.2-201ENST00000611632 603 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 RN7SL544P-201ENST00000617232 284 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.19□□□□□ -1.42
ERCC4Q92889 RN7SL763P-201ENST00000620922 284 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ERCC4Q92889 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ERCC4Q92889 AC112198.2-201ENST00000426589 6996 ntBASIC6.19□□□□□ -1.42
ERCC4Q92889 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
ERCC4Q92889 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ERCC4Q92889 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ERCC4Q92889 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.19□□□□□ -1.42
ERCC4Q92889 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ERCC4Q92889 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.18□□□□□ -1.42
ERCC4Q92889 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.18□□□□□ -1.42
ERCC4Q92889 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
ERCC4Q92889 PCAT14-202ENST00000627127 3935 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC092681.1-201ENST00000297369 291 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 FAM133CP-201ENST00000332869 704 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 AC023490.2-201ENST00000359859 470 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 Y_RNA.201-201ENST00000364052 96 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 RNA5SP394-201ENST00000364216 119 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 SNORD116.1-201ENST00000365628 92 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.18□□□□□ -1.42
ERCC4Q92889 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 Y_RNA.436-201ENST00000384097 102 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ERCC4Q92889 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.18□□□□□ -1.42
ERCC4Q92889 OR6C64P-201ENST00000419708 825 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.18□□□□□ -1.42
ERCC4Q92889 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC093084.1-201ENST00000424233 687 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.18□□□□□ -1.42
ERCC4Q92889 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.18□□□□□ -1.42
ERCC4Q92889 KCTD10P1-201ENST00000434203 625 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.18□□□□□ -1.42
ERCC4Q92889 Z84478.1-201ENST00000438230 1219 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.18□□□□□ -1.42
ERCC4Q92889 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.18□□□□□ -1.42
ERCC4Q92889 AC118469.1-201ENST00000442943 488 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AL592437.1-201ENST00000443781 492 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.18□□□□□ -1.42
ERCC4Q92889 AC104978.1-201ENST00000449387 391 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.18□□□□□ -1.42
ERCC4Q92889 RPS3AP43-201ENST00000479743 781 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 BTG4P1-201ENST00000510421 183 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.18□□□□□ -1.42
ERCC4Q92889 TMEM97P2-201ENST00000517841 403 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.18□□□□□ -1.42
ERCC4Q92889 AP000648.1-201ENST00000529682 397 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 NANOGNBP2-201ENST00000544753 553 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.18□□□□□ -1.42
ERCC4Q92889 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC6.18□□□□□ -1.42
ERCC4Q92889 VN1R83P-201ENST00000595685 445 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AL031601.1-201ENST00000605702 394 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC015982.1-201ENST00000608113 465 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC019131.2-201ENST00000609071 870 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.18□□□□□ -1.42
ERCC4Q92889 AC026124.2-201ENST00000621847 656 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC015660.5-201ENST00000623238 564 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC010435.1-201ENST00000623353 1177 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC007490.1-201ENST00000624321 703 ntBASIC6.18□□□□□ -1.42
ERCC4Q92889 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.18□□□□□ -1.42
ERCC4Q92889 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.18□□□□□ -1.42
ERCC4Q92889 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.18□□□□□ -1.42
ERCC4Q92889 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms