Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC112Q8NEF3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC112Q8NEF3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC112Q8NEF3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC112Q8NEF3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC112Q8NEF3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 GCNT6-201ENST00000379591 934 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 U3.30-201ENST00000391308 210 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC233289.1-201ENST00000403700 508 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AL078604.1-201ENST00000404609 466 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC062016.2-201ENST00000420950 676 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC073335.1-201ENST00000427776 363 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 PSMD10P3-201ENST00000437000 448 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 RPL7L1P1-201ENST00000448259 785 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AL591363.1-201ENST00000450091 483 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC079168.2-201ENST00000453977 416 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC098799.3-201ENST00000506095 438 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 LDHBP3-201ENST00000514909 822 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 HNRNPKP5-201ENST00000515300 253 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC005000.1-201ENST00000536192 288 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC010201.1-201ENST00000605051 540 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC093799.2-201ENST00000610062 578 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 AC135352.1-201ENST00000506173 1418 ntBASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CCDC112Q8NEF3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 INTS6P1-201ENST00000504674 2530 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 RNU1-82P-201ENST00000390851 165 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AP002530.1-201ENST00000405705 684 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 RPS26P13-201ENST00000419030 330 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 RPL7P11-201ENST00000437586 658 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 PA2G4P6-201ENST00000438325 1197 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AL935212.3-201ENST00000450729 284 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 snoU13.20-201ENST00000459180 104 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 RPS3AP41-201ENST00000462701 778 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AC092905.1-201ENST00000467527 949 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 BX284632.1-201ENST00000478218 541 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 RNA5SP228-201ENST00000516232 133 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 MIR4480-201ENST00000582492 71 ntBASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC112Q8NEF3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC112Q8NEF3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5□□□□□ -1.61
CCDC112Q8NEF3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC112Q8NEF3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms