Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC007390.2-201ENST00000606229 3803 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC026979.4-201ENST00000606555 645 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC009779.8-202ENST00000607990 932 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC109309.2-201ENST00000612597 332 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC005086.4-201ENST00000623065 213 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AL353662.3-201ENST00000625131 237 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC004808.2-201ENST00000627965 773 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC055839.1-201ENST00000634467 498 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 EED-206ENST00000527888 1422 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 DDX6P1-205ENST00000441966 1436 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SKP126-201ENST00000411143 300 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 NDUFA5P10-201ENST00000432147 357 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 HMGN1P36-201ENST00000446623 298 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AL121877.1-201ENST00000453704 622 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 EIF2S2P5-201ENST00000457635 968 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 PSMC1P13-201ENST00000458195 985 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 RPL7AP28-201ENST00000464513 571 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC094085.1-201ENST00000468914 584 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC117394.1-201ENST00000477323 567 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SL817P-201ENST00000480777 288 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 RPL7P39-201ENST00000481157 744 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SL741P-201ENST00000482473 289 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SL466P-201ENST00000497546 295 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 RNU6-889P-201ENST00000517189 103 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC068020.1-201ENST00000594215 661 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AL133247.2-201ENST00000603236 482 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC105254.2-201ENST00000603636 436 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 IMMP1LP3-201ENST00000604197 224 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC034236.3-201ENST00000605999 461 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC104307.1-201ENST00000616142 196 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC009032.1-201ENST00000617574 431 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AL163152.1-201ENST00000642001 374 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC134882.1-201ENST00000603738 1676 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 PNPT1P2-201ENST00000456768 2050 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 AC110792.3-201ENST00000595906 1614 ntBASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC71LQ8N9Z2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC006971.1-201ENST00000407916 4486 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SKP104-201ENST00000362605 328 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 RNA5SP502-201ENST00000362694 119 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 RNU6-244P-201ENST00000391028 104 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AL078604.1-201ENST00000404609 466 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 SNORA11.5-201ENST00000408163 128 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 RPS6P12-201ENST00000432491 726 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 RPL23AP19-201ENST00000436229 369 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 CYCSP11-201ENST00000436426 315 ntBASIC3.98□□□□□ -1.77
CCDC71LQ8N9Z2 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms