Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 uc_338.9-201ENST00000617424 182 ntBASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 AC109809.1-201ENST00000619665 545 ntBASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 AC135068.5-201ENST00000624197 983 ntBASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 AC073869.8-201ENST00000641806 335 ntBASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 AC092376.2-201ENST00000622621 4116 ntBASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 AL133268.1-201ENST00000405676 1401 ntBASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 AC011493.1-201ENST00000596753 1632 ntBASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC33Q8N5R6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 MIR133B-201ENST00000362210 119 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AL133388.1-201ENST00000404509 287 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 RN7SKP125-201ENST00000410481 302 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC092745.2-202ENST00000411880 369 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 MTND4P3-201ENST00000417829 541 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AL449283.1-202ENST00000418249 604 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 HMGB3P5-201ENST00000428894 612 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AL035246.1-201ENST00000433554 1255 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 ELOCP11-201ENST00000436690 332 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AL592437.1-201ENST00000443781 492 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 NSRP1P1-201ENST00000444067 1693 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 ELOCP16-201ENST00000444494 332 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 CDC42P1-201ENST00000456658 548 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 RPL7P32-201ENST00000457119 744 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 RN7SL447P-201ENST00000494711 245 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 RPL21P131-201ENST00000497298 483 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC023050.1-201ENST00000498198 304 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC100871.1-201ENST00000507871 1456 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 MTATP6P24-201ENST00000576835 677 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 H3F3BP2-201ENST00000583907 357 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC116651.1-201ENST00000609724 556 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AL122125.1-201ENST00000616999 600 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC004232.3-201ENST00000622977 525 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AC006963.1-201ENST00000624003 1052 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AL121594.5-201ENST00000631724 573 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 AL138820.1-201ENST00000617901 5305 ntBASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC33Q8N5R6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 AC019072.1-201ENST00000604535 1551 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 ANKRD36P1-201ENST00000344424 659 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 U3.2-201ENST00000362981 210 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 RNU6-549P-201ENST00000384433 107 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 AL592310.1-201ENST00000414330 671 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 RPS7P9-201ENST00000414704 586 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 CEACAMP7-201ENST00000444105 496 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 SNORD11.1-201ENST00000459482 85 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 RNU7-140P-201ENST00000459546 60 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 RN7SL188P-201ENST00000469842 285 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 IGBP1P4-201ENST00000503202 879 ntBASIC5.6□□□□□ -1.51
CCDC33Q8N5R6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms