Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC114495.1-201ENST00000441274 436 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 OR52E3P-201ENST00000452083 936 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 AC005412.1-201ENST00000580812 1049 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 AL451086.1-201ENST00000605596 223 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 AC116312.1-201ENST00000606841 314 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 AC092354.2-201ENST00000607786 514 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13CQ709C8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 ATP5F1P4-201ENST00000397288 746 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 RPL21P91-201ENST00000429231 479 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 RPL35AP21-201ENST00000437667 333 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 PPIAP3-201ENST00000450588 505 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13CQ709C8 AC012468.1-201ENST00000604888 430 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13CQ709C8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13CQ709C8 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13CQ709C8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13CQ709C8 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13CQ709C8 CKS1BP6-201ENST00000424932 240 ntBASIC3.5□□□□□ -1.85
VPS13CQ709C8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS13CQ709C8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS13CQ709C8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 AL359922.3-201ENST00000624779 1670 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 Y_RNA.510-201ENST00000384511 114 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 PCNPP4-201ENST00000414817 517 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 AC115285.1-201ENST00000424879 736 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 AL591363.1-201ENST00000450091 483 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 AC090686.1-201ENST00000481577 749 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 RN7SKP159-201ENST00000410657 292 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 TMX2P1-201ENST00000436507 708 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 RPL35AP15-201ENST00000468042 339 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 GAPDHP36-201ENST00000480688 918 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 AC005034.4-201ENST00000603612 899 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 AC113403.1-201ENST00000604910 193 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 AC010608.2-201ENST00000624830 470 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 AL122016.1-201ENST00000403365 367 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 NPM1P18-201ENST00000434232 732 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 AC233982.1-201ENST00000451247 436 ntBASIC3.49□□□□□ -1.85
VPS13CQ709C8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS13CQ709C8 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS13CQ709C8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS13CQ709C8 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.48□□□□□ -1.85
VPS13CQ709C8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS13CQ709C8 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms