Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF220Q5VTB9 AC009229.4-201ENST00000623854 1947 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AL137141.1-201ENST00000624622 4836 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 FAM133CP-201ENST00000332869 704 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 RNU6-839P-201ENST00000363347 108 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 RNU6-1151P-201ENST00000384684 107 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 MIR130B-202ENST00000385018 82 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 SNORD65.1-201ENST00000390889 71 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 GAPDHP42-201ENST00000406848 981 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 RNU6-603P-201ENST00000411403 107 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 VN1R21P-201ENST00000426703 765 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 SEPT7P5-201ENST00000434048 306 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 NDUFB4P8-201ENST00000435351 367 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 TIMM8BP2-201ENST00000445940 251 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC009963.3-201ENST00000458090 486 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 PNPLA4P1-201ENST00000458328 305 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC104971.1-201ENST00000495117 578 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC105384.2-201ENST00000508433 640 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 RNA5SP135-201ENST00000517019 125 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 RN7SKP35-201ENST00000517210 151 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AP006245.2-201ENST00000522004 300 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 MIR6809-201ENST00000612189 116 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AL139407.1-201ENST00000613826 1175 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC245014.3-201ENST00000618589 347 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC124312.6-202ENST00000623624 418 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 MIR1322-201ENST00000638013 71 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AL118496.1-201ENST00000440201 1812 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 DCAF13P3-201ENST00000561147 1334 ntBASIC5.38□□□□□ -1.55
RNF220Q5VTB9 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF220Q5VTB9 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 MFSD8-239ENST00000641590 2479 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC090017.1-201ENST00000548612 1779 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 MIR217-201ENST00000384817 110 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 LRRC37BP1-201ENST00000398851 714 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 SETP15-201ENST00000412724 337 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AL450992.3-201ENST00000413192 568 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 MRPS36P1-201ENST00000421291 307 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 Z93242.1-201ENST00000427102 353 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 USP9YP31-201ENST00000431405 881 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 TUBB4BP6-201ENST00000437576 479 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC092393.1-201ENST00000439625 742 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 FGF7P5-201ENST00000441829 291 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC023141.8-201ENST00000442554 208 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 MTCYBP11-201ENST00000447254 1109 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 RNA5SP103-201ENST00000459503 118 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC108734.3-201ENST00000481241 1165 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC109471.1-201ENST00000511631 612 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms